KEGG   Leptothrix cholodnii: Lcho_0959
Entry
Lcho_0959         CDS       T00681                                 
Name
(GenBank) DNA gyrase, A subunit
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
lch  Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:lch00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lch03032]
    Lcho_0959
   03400 DNA repair and recombination proteins [BR:lch03400]
    Lcho_0959
Enzymes [BR:lch01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Lcho_0959
DNA replication proteins [BR:lch03032]
 Prokaryotic type
  DNA Topoisomerases
   Lcho_0959
DNA repair and recombination proteins [BR:lch03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Lcho_0959
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C
Other DBs
NCBI-ProteinID: ACB33231
UniProt: B1Y2L5
Position
1023035..1025692
AA seq 885 aa
MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELSNDWN
RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDNAAAM
RYTEIRLAKIAHEMLADLDKETVDFGPNYDGSEKEPLVLPSRLPNLLVNGSTGIAVGMAT
NIPPHNLNEVVDACLHLMKNPEASIEELMEIIPAPDFPTAGIIYGINGVREGYRTGRGKV
VMRAKVHFEDIDRGQRQSIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG
MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALIDGQPKLCNLKQLLEIFLEHRRE
VVTRRTVFELRKARDRGHVLEGLAVALANIDEFIETIKNSPTPPVAKLALMSKSWDSSVV
REMLTRAEGDTPGGRAAFRPEGLAPQFGMQADGLYRLSDDQAGEILQMRLQRLTGLEQDK
IVGEYKDVMAQIADLLDILAKPARVTVIIGDELTAVRQEFGQSKIGVRRSVVEHNVQELG
TEDLITPTDMVVTLSHTGYIKSQPLAEYRAQKRGGRGKQATATKDDDWVDELFIANTHDW
MLCFSNRGRVYWLKVWEVPQGGRNSRGKPIVNMFPLQPDEKINVVLPLTGANRSFPADHY
IFMCTARGTVKKTALDDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDGGKAVR
FDEEDVRPLGRQARGVRGMALDEGQSVIAMLVAEDETQSVLTATENGYGKRTSILEYTRH
GRGTKGMIAIQQTERNGKVVAATLVRPNDEIMLITDRGVLVRTRVAEIRELGRATQGVTL
IALDEGAKLSGLQRIVENDANESIADPGVDANPEADAGVPGEEST
NT seq 2658 nt   +upstreamnt  +downstreamnt
atgacgcaattcgccaaagaaaccctgcccatcagcctcgaagaggagatgcgccgttcc
tacctcgattacgcaatgagcgtgatcgtcggacgtgccctgcctgatgcgcgtgacgga
ctgaagccggtgcatcgccgcgtgctgttcgcgatgcacgagttgagcaacgactggaac
cggccttacaagaagtcggcccgcatcgtcggcgacgtgatcggtaagtaccacccgcac
ggcgataccgcggtctacgacaccatcgtgcgcatggcgcaggatttttcgctgcggcac
atgctggtcgacggccagggcaacttcggctcggtcgacggcgacaacgccgcggcgatg
cgctacaccgaaatccgcctggccaagatcgcccacgagatgctggccgatctggacaag
gaaaccgtcgacttcggtcccaactacgacggttccgaaaaggagccgctggtgctgccc
agccgcctgcccaacctgctggtgaacggctcgaccggcatcgcggtgggcatggccacc
aacatcccgccgcacaacctcaacgaagtcgtcgatgcctgcctgcatctgatgaagaac
cccgaggcgtcgatcgaggagctgatggagatcatcccggcgcccgacttcccgaccgcc
ggcatcatctacggcatcaacggcgtgcgcgagggctaccgcaccggccgcggcaaggtg
gtgatgcgcgccaaggtgcacttcgaggacatcgaccgcggccagcgccagtcgatcatc
gtcgacgagctgccctaccaggtcaacaagaagacgctccaggagcgcatggccgagctg
gtgcacgagaagaagatcgaaggcatcagccacatccaggacgagtccgacaagtcgggc
atgcggctggtgatcgagctcaagcgcggcgaggtgcccgaggtcgtgctcaacaacctc
tacaagcagacccagctgcaggacaccttcggcatcaacatggtggcgctgatcgacggt
cagcccaagctgtgcaacctcaagcagctgctcgagatcttcctcgagcaccgccgcgag
gtcgtcacccgccgcaccgtgttcgagctgcgcaaggcgcgcgaccgcggccacgtgctc
gaaggcctggcggtggcgctggccaacatcgacgagttcatcgagaccatcaagaactcg
cccacgccgccggtggccaagctggcgctgatgagcaagagctgggattcgtcggtggtg
cgcgagatgctcacccgcgccgagggcgacacgccgggcgggcgcgccgccttccgcccc
gagggcctggcgccgcagttcggcatgcaggccgacgggctgtaccgcctgtccgacgac
caggccggcgagatcctgcagatgcgcctgcagcgcctgaccgggctggagcaggacaag
atcgtcggcgagtacaaggacgtgatggcgcagatcgccgacctgctcgacatcctggcc
aagccggcgcgggtcacggtcatcatcggcgacgaactgacggccgtgcgccaggagttc
ggccagagcaagatcggcgtgcgccgctcggtggtcgagcacaacgtgcaggagctcggc
accgaggacctgatcacgccgaccgacatggtggtcacgttgagccacaccggctacatc
aagagccagccgctggccgaataccgcgcgcagaagcgcggcgggcgcggcaagcaggcc
accgcgaccaaggacgacgactgggtcgacgagctcttcatcgccaacacccacgactgg
atgctgtgcttcagcaatcgcggccgggtctactggctgaaggtctgggaggtgccgcaa
ggcgggcgcaactcgcgcggcaagccgatcgtcaacatgttcccgctgcagcccgacgag
aagatcaacgtcgtgctgccgctgaccggcgccaaccgcagcttcccggccgatcactac
atcttcatgtgcaccgcgcgcggcacggtcaagaagaccgcgctcgacgacttcagcaac
ccgcgcaaggccggcatcatcgcggtcgacctcgacgaaggcgacttcctgatcggcgcg
gcgctgaccgacggccagcatgacgtgatgctgttctccgacggcggcaaggcggtgcgt
ttcgatgaagaagacgtgcgcccgctgggccgccaggcgcgtggcgtgcgcggcatggcg
ctcgacgaaggccagagcgtgatcgcgatgctggtggccgaggacgagacgcagagcgtg
ctgaccgccaccgaaaacggctacggcaagcgcaccagcatcctcgagtacacgcgccac
ggccgcggtaccaaggggatgatcgcgatccagcagaccgagcgcaacggcaaggtggtg
gcggcaacgttggtgcggcccaacgacgagatcatgctgatcaccgatcgcggtgtgctg
gtccgcacacgcgttgctgaaattcgcgaattgggacgcgccacccagggcgtgacgctg
atcgcgctcgatgaaggtgccaagctgtcgggtttgcagcgcatcgtcgaaaacgatgcc
aacgagtcgatcgccgatcccggcgtcgacgccaaccccgaagccgatgccggagtcccc
ggcgaggagagcacctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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