KEGG   Leptothrix cholodnii: Lcho_4003
Entry
Lcho_4003         CDS       T00681                                 
Name
(GenBank) sun protein
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
lch  Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:lch00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lch03009]
    Lcho_4003
Enzymes [BR:lch01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     Lcho_4003
Ribosome biogenesis [BR:lch03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    Lcho_4003
SSDB
Motif
Pfam: Methyltr_RsmB-F Methyltransf_25 NusB Methyltransf_31 FtsJ Methyltr_RsmF_N
Other DBs
NCBI-ProteinID: ACB36257
UniProt: B1Y8J1
Position
complement(4486009..4487370)
AA seq 453 aa
MKPAPPAPQPPIGAAPSPQSLPLHRLLGHTADAVALVLAGHSLNEALAACPAPARPGCQA
LSFHVLRCLGGAQAARAHLAARMPPPPVHSLLLSALALLWPREPQPYAPHTLVDQAVACA
HVRAPASASFVNAVLRRFLRERDALVPRWEAADPVVRHQHPRWWIDQLQRDWPKQWQALL
GAANQHAPMALRVNARQTDAAGYRAELAAIGIEAQVVSSHALVLHKPAPVQALPGFERGR
VSVQDLSAQVAAPLLIGSGPDRLAPGARVLDACAAPGGKTAHLLELAELDLLALDVDATR
LARVEQTLQRVGLRAALAVADAGEPSRWWDGQPFDAILLDAPCSASGIVRRHPDVRWLRR
ASDIKALAATQSRLLDALWGLLKPGGRLVYATCSVFRAEGSGQVAAFLQRTPGAIARPSP
GHLLGVVDNPAQAGEVASVAGDGFFYARLDKSM
NT seq 1362 nt   +upstreamnt  +downstreamnt
gtgaaacctgccccacccgccccccagccgccgatcggcgccgccccgtcacctcagtcc
ctgcctctgcatcgcctgctcggccacaccgccgacgccgtcgcgctggtgctggccggc
cattcgctgaacgaggcgctcgccgcctgtccggcgccggcccggccgggctgccaggcc
ctgagtttccacgtgctgcgctgcctgggcggcgcgcaggcggcgcgtgcgcacctggcc
gcgcgcatgccgccgccgccggtccattcgctgttgttaagcgcgctcgcgctgctctgg
ccgcgtgagccgcagccctatgcaccgcacaccctggtcgaccaggcggtggcctgcgca
cacgtccgggcgccggccagcgcgtcgttcgtgaatgcggtgctgcgacgtttcctgcgc
gagcgcgacgcgctcgtgccgcgctgggaggccgccgatccggtggtgcgccatcagcac
ccgcgctggtggatcgatcaattgcagcgcgactggcccaaacaatggcaggcgctgctc
ggcgccgccaaccagcacgcgccgatggccttgcgcgtcaacgcgcgccagacggacgcg
gcgggctaccgggccgaactggcggccatcggcatcgaggcgcaggtcgtgtcgagccat
gcgctggtgctgcacaagccggcgccggtgcaggccttgcccgggttcgagcgcgggcgg
gtgtcggtgcaggatctgtcggcccaggtggccgcgccgctgctgatcggcagcgggccg
gatcggttggcgccgggtgcgcgcgtgctcgatgcctgcgccgcgccgggtggcaagacc
gcccatctgctcgaactggccgaactcgacctgctggcgctcgatgtcgatgccacccgc
ctggcccgcgtcgagcagaccctgcagcgtgtcggcctgcgtgccgcgctggcggtggcc
gatgccggcgagccgtcgcgctggtgggacgggcagccgttcgacgcgatcctgctcgac
gcgccctgcagcgcctcgggcatcgtgcgccgtcaccccgacgtgcgctggttgcgtcgc
gccagcgacatcaaggcgctggcggccacccagtcgcgcctgctcgatgccctctggggg
ttgctcaagccgggcgggcgtctcgtctacgcaacgtgttcggtgttccgggccgagggt
tcgggccaggttgctgcgtttttacaacgaacacccggtgcgatcgccaggccgtcgccc
ggtcatctgctgggtgtcgtcgacaatccggcccaggccggggaggttgccagcgtcgct
ggcgacggctttttttatgcccggctggacaaatcgatgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (34)   

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