KEGG   Leuconostoc citreum: LCK_00633
Entry
LCK_00633         CDS       T00663                                 
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit, Gram-positive type
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
lci  Leuconostoc citreum
Pathway
lci03030  DNA replication
lci03430  Mismatch repair
lci03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LCK_00633 (polC)
   03430 Mismatch repair
    LCK_00633 (polC)
   03440 Homologous recombination
    LCK_00633 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lci03032]
    LCK_00633 (polC)
   03400 DNA repair and recombination proteins [BR:lci03400]
    LCK_00633 (polC)
Enzymes [BR:lci01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LCK_00633 (polC)
DNA replication proteins [BR:lci03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LCK_00633 (polC)
DNA repair and recombination proteins [BR:lci03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LCK_00633 (polC)
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger DNA_pol3_a_NI tRNA_anti-codon DNA_pol3_a_NII HHH_6 RNase_H_2 DEDDh_C HHH_3 DUF655
Other DBs
NCBI-ProteinID: ACA82465
UniProt: B1MY63
Position
663481..667794
AA seq 1437 aa
MALTQQEQLTHLMTQIGLSDELQSYFINGRLTQVIVSKQDKLWTFKIALTAILPANVFVQ
FRQQLHTAFTNIAQIKLDITTTDRSINEIQMNQYWHLALSDSKLNHTTAQQLASNTSLAL
LDETQYTVAVGAESLFKALNQDVIDSIVAAYQTFGFPEITLTPQQDEALAQQIEDSVAQH
HAKAQEDLQKAIRASEQAKPKTTAEGVALTLGRKIATDADITRLETIDSEENRVVVEGFI
FANEVRELRSGRKLMTIKITDYSSSISAKKFSNNENDEAVFDQIKPGMWVRLSGNVQEDT
YARELVLNIYDLQVIDHANRAESYQGETKHIELHVHTAMSAMDAVTDYGALAKLAKSWGQ
EALGVVDTANVQGFPEAVATGKKNDLKMIYGMEANLVEDGEPIAFNLAPVPLLGKETIYV
AFDLETTGLSAVTDKIIELSAVKMQMGNVIDKFSEYINPGFPLSDFTTELTSITDAMVAN
ADTEESIVSRFRAWVRDAILVGHNVTFDIGFMNAAYSRYNQPDISNPIIDTLPFTRWLYP
DYKSYRLGTIAKRFNINLEQAHRAIFDSETTGHIAWRLIKEANTTYALTDHEQLNDHMTE
GDAWKHGRPVHATLLVQNTVGLKNLYKLVSRSNIEFFARVPRIPRSVLNQLREGLLIGTG
DTSGDVIMTLIEKGRVAALQKAKYYDFIEIQPTANYAPMIESGLIANESQLQSILKDMVS
IGDELDKTVVVTGDIKYTNPEDRIYRQILIGTQPGNPQNRTALPENYFRTTQQLLDDFAF
MGDTLARQLVIDNTHKIANCLETITPLKSGSYPPNIPTAGDELTRRTFENAKRWYGDPLP
EVIQARIDQELEAIIGNGFAPHYMIAQKLVEKSNKDGYLVGSRGSVGSSFVATMSGITEV
NPFAPHYRSAHGDYFELADPKIYESGYDLPDKPDPNHPGEMLIGDGQNIPFETFMGFKGD
KVPDIDLNFSGDYQPIAHNYMKVLFGEHNVYRAGTIATVAEKTAFGYVKGFERDHDKNYR
GTEVERLAQGITGVKRTTGQHPGGILIVPREYDVYDFTPVQYPADDQKSLWQTTHMDYHA
IHDNLLKMDILGHDDPTMVRTLKDMSGIDPQSIPVNDPGVLSLFTSTDALGVNPEQIFSK
TGTLGLPEFGTNFVRGMLEETQPHTYSELLQISGLSHGTDVWLGNANELIENGTATIGTV
IGTRDKIMTDLINWGFPAADAFNVMEKVRKGKGITDEYQAQLRAAKIPEWYIQSMLKIKY
MFPRAHAAAYVLMALRIAYFKVYFPTIYYATYFSVRADQFDIVAMSRGKNATKEALKRLR
ALGNDATVGDKNLLTVLEMANEALERGIQFSMVDLYRSEASEWVIDGDTLIPPFSAVPSL
GENVAKQIIVARQEKPFLSKEDLKKRGKVSQTIIDYLSQNSVLDGMPDENQLSLFDF
NT seq 4314 nt   +upstreamnt  +downstreamnt
atggcattaacccaacaagaacaattaacgcatttgatgacacagattggtttgtcagat
gaattacaatcctactttataaatggtcgtttaacgcaagtgattgtgtctaagcaagac
aaactatggacgtttaaaatagcattaacagctattttgccagccaatgtgtttgtccaa
tttagacaacagttacatacggcatttacaaacattgctcagattaagttagatattaca
acaactgaccgcagtattaatgaaatacagatgaatcagtactggcatctggctttatca
gattcaaaattaaatcatacgacagcgcaacaattggctagtaatacaagcttggcatta
ctagatgagacgcagtataccgttgcagttggtgccgaatcactctttaaagcgctcaat
caagatgttatcgattcaatcgttgcagcatatcaaacttttggatttcctgaaattact
ttaacacctcagcaagatgaagcactagcacaacaaattgaagatagtgttgcccaacat
catgcgaaagcacaagaagacttacaaaaggcaattcgtgctagcgaacaagcgaagccg
aaaacgacagctgaaggtgttgcactcacgcttggccgtaaaattgccactgacgcggat
attacgcgactagaaacaatcgattctgaagaaaatcgtgtggttgttgaaggatttatt
tttgctaatgaagtgcgtgaattacgttccggacgcaaattaatgacgattaaaataact
gattattcaagttcgatttcagcaaaaaaattctcaaataatgagaatgacgaagctgtt
tttgatcaaattaagccaggtatgtgggttcgtttatctggtaatgtgcaagaggataca
tacgctcgtgaattagttcttaatatttatgatctacaggtgatagaccatgctaatcgt
gcagagtcgtatcaaggtgaaactaaacacattgagttacatgtccacacggcaatgtct
gctatggatgcagtgaccgattatggcgcgctggcaaagttagcaaaaagttgggggcaa
gaggccttaggtgtggttgatacggcaaacgttcaaggctttccagaagctgttgcgacc
ggtaaaaaaaatgatttgaaaatgatttatggcatggaagctaatcttgtcgaagatggc
gaaccaattgcctttaaccttgcgccagttcctcttttaggaaaagaaacaatttatgtc
gcatttgatttagaaaccaccggattatctgctgttacggacaaaattattgaattatca
gctgttaaaatgcagatgggcaatgtgattgacaagttttcagaatatatcaatccggga
tttccgttgtctgattttacaactgagttgacctccattactgatgcgatggtggctaat
gcagacaccgaagaaagtatagtatcacgctttagagcgtgggttagggatgctatttta
gtcggccataatgttacatttgatattggatttatgaacgcggcttatagtcgctataat
cagcccgatatcagtaacccgattattgatactttaccatttacacgctggctttaccca
gattataagtcgtaccgtttaggaacgattgcaaaacgttttaatatcaacttagagcag
gcgcatcgagcaatttttgattcggaaacaacgggacacattgcttggcgactaattaag
gaagctaatacgacctatgctttaacagaccatgaacaactcaatgatcatatgacagag
ggagacgcctggaaacatggccgcccagtccatgccacattattagttcagaatacagtt
ggtctaaaaaatctttataaattagtgtcacgatcaaacattgagttttttgctcgtgta
ccacgtattccaagatccgtgcttaatcagttgcgtgaaggtttattgattggtacgggt
gacaccagcggcgatgtgattatgacactgattgaaaagggccgtgtagctgctttacaa
aaagcaaagtattatgattttattgaaattcaacccaccgcaaattatgcaccaatgata
gaatcaggtttgattgctaatgagtcacaattgcaatcaatattaaaagatatggtcagt
attggtgatgagctggataaaacggttgttgtgactggtgatattaagtacacaaatcct
gaagaccgaatttatcgtcaaattttaattggcacgcaacccggtaatccacaaaatcgt
acggcactaccagagaattattttcgaacaacacaacaacttttggacgattttgctttt
atgggtgatactttagcccgtcagttggtaattgataacacgcataaaattgctaattgc
ttggaaacaattacgccattgaaaagtggttcatatccgccaaacattccgacagctggg
gacgaattaactagacgcacatttgaaaatgcgaaacgatggtacggtgatcctttgcca
gaagtgatacaggctcgaattgatcaagaattagaggcgattattggaaatggctttgcg
ccacactacatgattgcacaaaaattagttgaaaaatcgaacaaggatggctacttagta
ggctcgcgtgggtcagttggttcttcttttgtcgctacaatgtcaggaataactgaagtt
aatccttttgcaccgcactaccgtagtgcacatggtgattattttgagttagctgatccc
aaaatatatgaatctggttatgatttacctgataagcctgacccgaatcaccctggggag
atgctaattggtgacggtcaaaacattccatttgaaacttttatggggttcaagggtgat
aaagtgcccgatattgatttgaatttttctggtgattatcaacctattgcacataattac
atgaaagtattgtttggtgaacataatgtttaccgtgcaggaacgattgctaccgtagca
gaaaaaactgcttttgggtatgttaaaggctttgaacgtgatcatgataaaaattatcgt
ggtactgaggtagaacgattagcacaaggtattacaggggtaaaacggaccacaggacaa
catccaggcggtattttaattgtgccgcgtgaatatgatgtgtatgattttacgccagta
caatacccagctgatgatcaaaagtcattgtggcagaccacacacatggattatcatgct
attcatgataacctgttgaaaatggatattttgggtcatgatgatcctaccatggttcgt
acgttaaaagatatgtctggtattgatccacaatccataccagttaatgaccctggcgtt
ttgagcttgtttacgtcgactgatgcgcttggggttaaccctgaacaaatattttctaaa
acgggtacattaggattaccagagttcggcacaaatttcgtccgtggtatgttggaagaa
acgcagccgcatacttattccgagctactacagatttctggactatcgcacggcacagat
gtttggttaggcaacgccaacgaattaattgaaaatggcactgcaacgatcggtactgtt
attggaacacgtgacaaaatcatgaccgatttgattaactggggctttccagcggcggat
gcttttaacgttatggaaaaagtccgtaaaggtaaaggcattactgatgaatatcaggcg
caattaagagcggctaaaattccagagtggtatatccaatcaatgcttaaaattaagtat
atgttcccacgtgcacacgcggcggcatatgtcttgatggcgcttcgtattgcttatttt
aaggtttatttcccgacaatatattatgctacgtatttttctgtgcgggccgaccaattt
gatattgtggcgatgagccgtggaaaaaatgcaactaaagaggctttaaagcggttgcgt
gctttgggcaatgatgcgacggtcggcgataaaaatttgctaaccgtgttagaaatggct
aatgaagctttagaacgtggcattcaattctcaatggttgatttgtatcggtcggaagca
agtgagtgggtgattgacggtgatacgttgattccaccattctcagctgtccccagttta
ggtgaaaacgtagcaaagcagattattgtggcacgacaagaaaagccgtttttaagtaaa
gaggatttgaaaaagcgaggcaaagtttcgcaaactattattgattatttatcacagaat
tcggtccttgatggtatgcctgatgaaaatcagcttagtttgtttgatttttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (25)   

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