KEGG   Leuconostoc citreum: LCK_01617
Entry
LCK_01617         CDS       T00663                                 
Name
(GenBank) Superfamily I DNA and RNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
lci  Leuconostoc citreum
Pathway
lci03420  Nucleotide excision repair
lci03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LCK_01617
   03430 Mismatch repair
    LCK_01617
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lci03400]
    LCK_01617
Enzymes [BR:lci01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LCK_01617
DNA repair and recombination proteins [BR:lci03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LCK_01617
   MMR (mismatch excision repair)
    Other MMR factors
     LCK_01617
SSDB
Motif
Pfam: UvrD_C UvrD_C_2 UvrD-helicase Viral_helicase1 AAA_19 SLFN-g3_helicase AAA_16 DEAD AAA_30 NACHT Filament Mis12 AAA_12 Vac_Fusion
Other DBs
NCBI-ProteinID: ACA83440
UniProt: B1MW75
Position
complement(1695287..1697653)
AA seq 788 aa
MDNQIKIDETQYLNKTLKAMEKSLKTTAAEIKRTNKHIDTVSQSWGDVRLKTDTYSGIVE
TAASIRQQQQMLSERENSKTRAEHRFTTLTQQIDKPYFARIDFSESATDSGEAETIYIGL
SSFSDDNNKFLVYDWRAPVASIYYDGGIGDVTYLTPDGSQRAHVTLKRQFQIEDGVIVTL
FDTEEAIGDAMLMSALSGESSTKMKSIVTTIQKEQNKIIRNTAADLLFVQGAAGSGKTAA
VLQRVAYLLYRYRGKLTSGQVVLFSPNQLFNDYIDNVLPELGEQNMVQMTFYQYASRRLP
KMAVETLQARFEEDQTSSTIALAKGSLAMFDAVTAYAQHLNRKDLKLRSLMFRGEPLISK
TRIAEIYYQYNDNYKLSQRLDATRDTLMRSLSARIGSEMRKDWVELAIENLSKQEYDTLV
GAGKVRVGDDQENDAASRTRQAQLGDGPKAREFASEKAERQFLSRQIVTQALKPLARQIR
RGSFLNINAQFVDLLRQLPNYLDLAQFDLTLSEWQQHVETVIDNLKNKQLSLTDTTLYLY
LYDLITGKTGERDIRFLFIDEIQDYTPFQLAFLKFSFPRAKFTVLGDLNQAIFTKDNANN
LSRDFAKLFDSDRVERVNLTQTYRSTQQITDFTKYILKGGQNIEAFNRSGQKPRVKLSPN
EADMLHQLQQQLTEYSQQHDTTAIITKTLADAQLLSEQLQDTSVTLIQSENQRLAQGTII
VPSYLAKGLEFDAVIIWHADNTRYGQDSERRLLYTVASRAMHSLTLLAEKQVSCLLDHVP
EKLYEVES
NT seq 2367 nt   +upstreamnt  +downstreamnt
ttggataatcaaatcaaaattgatgaaacacaatatcttaacaaaacgctgaaagctatg
gaaaagtcgcttaaaacgacagcagctgagatcaaacgtaccaataagcatattgacact
gtatctcagagttggggtgacgtgcgactaaaaacagatacttattctggtattgtcgaa
acagcggcttctatccgtcagcaacagcaaatgttgtctgaacgtgaaaattccaaaacg
cgggcagaacatcgttttacaactttgacgcagcaaattgacaaaccctattttgctcgt
attgacttcagcgaatcagctacggacagtggtgaagcagaaacaatctatattggcttg
agctcttttagtgacgataacaacaaatttttagtctatgattggcgtgcgccggtggcg
tctatttattatgacggtggtataggtgatgtgacctatttaacccctgatggttctcag
cgtgcgcacgtcacattaaaacggcaattccagattgaagatggcgtgattgttacattg
tttgatacggaagaagctataggtgatgcgatgttgatgagcgccttatcgggtgaatca
tcaactaaaatgaaatctattgtcaccacaatccaaaaagaacaaaacaaaattattcgt
aatactgccgctgatttgctatttgttcaaggtgccgctggatcaggaaaaacggcagct
gttctacaacgtgtagcttacttattgtatcgttatcgtggtaaattaacgtcaggccaa
gttgtgttattcagtccaaaccaattattcaacgactatattgataatgttttaccagaa
ttaggtgaacaaaacatggtgcaaatgactttttatcagtatgcatcacgacgattgcca
aaaatggcagttgagacgttgcaagcgcgttttgaagaagatcaaacttcatccacaatc
gctttagctaaggggagcttagcaatgtttgatgctgttacagcctatgcccaacacttg
aaccgtaaagatttaaaattgcgatcgctgatgttccgtggcgaacccttaatttctaag
acacgtattgcagaaatttattatcaatacaatgataactataaattgagccaacgactg
gacgccacgcgtgatacactcatgcgtagtttgagtgcgcgcattgggtcagaaatgcgc
aaagattgggttgaacttgccattgagaatttgtccaagcaagaatatgatacattagtg
ggtgctgggaaagtgcgtgttggcgatgatcaagaaaatgacgccgcttcgcggacacgt
caagcgcaactgggggatggccctaaggcgcgtgaatttgctagtgaaaaggccgaacgc
caattcttatctcgccaaattgttacgcaagcactgaaaccgttagcgcgtcaaatcaga
cgcggtagttttttaaatattaatgcccaattcgttgacttgttacgtcaattaccaaat
tacttagatttagcgcagtttgacctaactttatctgagtggcagcaacacgttgagaca
gtcatcgataatttgaaaaataaacagttatcgctaactgacacaacactatatctttat
ttgtatgatttaattactggtaaaacaggggaaagagatattcgtttcctatttattgat
gaaattcaagattacacaccatttcaattggcttttctgaaattcagttttccacgggca
aaattcaccgtgttgggtgatttaaatcaagcaatttttacgaaagataatgcgaataac
ttgtcgcgtgattttgctaagttgttcgatagtgaccgtgttgagcgtgtcaacttaacg
caaacatatcgttcgacacagcaaattactgactttacgaaatatattctcaaaggtggc
caaaatattgaggctttcaaccgttcagggcaaaaacctagggttaagttgtcaccaaat
gaagctgacatgttacatcaattgcagcaacaattaactgagtattcacagcaacacgat
acgacagccattattacaaagacgttggcagatgctcagttgctgtccgagcagctacaa
gataccagtgtgacattgattcaatcagagaatcagcgtttggcacagggaaccattatt
gtgccatcctacttagctaagggattggaatttgatgccgttattatctggcacgcagat
aatacacgttatgggcaggattcagaaaggcgtttgctgtatactgtcgccagtcgcgca
atgcatagtttgacattattagccgaaaagcaagtctcttgtttgctagatcatgttcct
gaaaaattgtatgaggttgagtcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (25)   

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