KEGG   Latimeria chalumnae (coelacanth): 102349106
Entry
102349106         CDS       T02913                                 
Symbol
ATG5
Name
(RefSeq) autophagy related 5
  KO
K08339  autophagy-related protein 5
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04136  Autophagy - other
lcm04140  Autophagy - animal
lcm04216  Ferroptosis
lcm04621  NOD-like receptor signaling pathway
lcm04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    102349106 (ATG5)
   04136 Autophagy - other
    102349106 (ATG5)
  09143 Cell growth and death
   04216 Ferroptosis
    102349106 (ATG5)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    102349106 (ATG5)
   04622 RIG-I-like receptor signaling pathway
    102349106 (ATG5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcm04131]
    102349106 (ATG5)
   03029 Mitochondrial biogenesis [BR:lcm03029]
    102349106 (ATG5)
Membrane trafficking [BR:lcm04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    102349106 (ATG5)
Mitochondrial biogenesis [BR:lcm03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    102349106 (ATG5)
SSDB
Motif
Pfam: ATG5_UblA ATG5_UblB ATG5_HBR DUF6782
Other DBs
NCBI-GeneID: 102349106
NCBI-ProteinID: XP_005997944
Ensembl: ENSLACG00000013228
UniProt: H3AZG4
Position
Un
AA seq 275 aa
MSDDKDVLRDVWFGRIPTCFTLYQDEMTEREAEPYYLLLPRVSYLTLVTDKVKKHFQKVM
RPEDIGEAWFEYEGTPLKWHYPIGLLFDLHASNTALPWSIVVHFKNFPDKDLLHCPSKDV
IEAHFMSCIKEADALKHKSQVINEMQKKDHKQLWMGLQNDKFDQFWAINRKLMECPADEN
GFRYIPYRIYQATSERPFIQKLFRPFTADGQPHTLGDLLREVFPAAITPEDSEKKFQVVI
HGIEPMLETPVQWLSEHLSYPDNFLHISIIPQPTD
NT seq 828 nt   +upstreamnt  +downstreamnt
atgtcagatgacaaagatgtgcttcgagatgtgtggtttgggcgaataccaacctgtttt
actctttatcaggatgagatgacagaaagggaggctgagccttattatctgctccttcca
agagtgagttatctgactttggtcactgacaaggtgaaaaagcattttcagaaggttatg
aggccagaggatattggggaggcatggttcgagtacgagggcacaccgttgaagtggcat
tatcccattggtttgctttttgatcttcatgcttcaaacacagcccttccatggagcatt
gtagttcattttaagaattttccagataaggatctccttcactgcccttctaaagacgtg
attgaagctcacttcatgagctgtattaaagaagctgatgccttaaagcacaaaagtcaa
gtaattaatgaaatgcagaaaaaggatcacaagcagctctggatgggtttacaaaatgac
aaatttgaccagttttgggctataaatagaaagctaatggagtgtcctgcagatgaaaat
ggatttcgatacataccttataggatatatcaggcaacaagtgagcgcccctttatccaa
aaattatttcgaccattcaccgcagatggacagccccataccctgggcgacttactgaga
gaggtgtttcctgctgccatcactcctgaagatagtgaaaagaagttccaagtagtgatt
catgggattgagccgatgctggagacgccagttcagtggttaagtgaacatctgagttat
ccagacaatttccttcacattagtatcattccccagcctactgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

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