KEGG   Latimeria chalumnae (coelacanth): 102350090
Entry
102350090         CDS       T02913                                 
Symbol
CHRNA4
Name
(RefSeq) cholinergic receptor nicotinic alpha 4 subunit
  KO
K04806  nicotinic acetylcholine receptor alpha-4
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    102350090 (CHRNA4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:lcm04040]
    102350090 (CHRNA4)
Ion channels [BR:lcm04040]
 Ligand-gated channels
  Acetylcholine (nicotinic)
   102350090 (CHRNA4)
SSDB
Motif
Pfam: Neur_chan_memb Neur_chan_LBD DUF2417
Other DBs
NCBI-GeneID: 102350090
NCBI-ProteinID: XP_005993532
Ensembl: ENSLACG00000010383
Position
Un
AA seq 555 aa
MVDEKNQVMTTNVWVKQEWYDYKLRWDPQDYENVTSIRIPSELIWKPDIVLYNNADGDFA
VTHLTKAHLFYDGRINWMPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYDRAKIDLVSM
SSQVDQLDYWESGEWFIVSATGKYNIKKYECCVESYPDITYFFIIKRLPLFYTINLIIPC
LLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTM
IFVTLSIVITVFVLNVHHRSPRTHNMPAWVRRVFLDVIPRLLFMKRPSTMKENCKKLIEL
MHKKNNSPRYLSDIETEPSFAATPSDSQQSKDPSPTSPFCHHIDDSSRPQSICKSPSDQY
SVLHEEPTEASCPSPSSQHHHFAEDQSSSPSKGRSLSVEYTFNTSDLPQPNTRCRSRSFQ
YCHIHEESAQLNGHGKSPASQHGHVLEDQSQSKPPQCKCNRKKISAAAISSSRSLKSLST
KDQHLLLMSPAMKLAVEGVQYIADHLKAEDADISVKEDWKYVAMVIDRIFLWMFIIVCLL
GTVGLFLPPWLAGMI
NT seq 1668 nt   +upstreamnt  +downstreamnt
atggtggatgaaaaaaatcaggtgatgaccaccaacgtctgggtcaagcaggaatggtac
gactacaagctgcgttgggatccacaggattatgaaaatgtgacgtcaatccgaatcccc
tccgagctcatctggaaaccagacattgtgctctacaacaacgctgatggggactttgca
gtgactcatcttacaaaagcccacttattttacgacggaagaatcaactggatgccgccc
gccatctataaaagttcctgcagcattgacgttactttctttcccttcgatcagcaaaac
tgcaccatgaagtttggctcttggacttacgaccgggccaaaatagaccttgtgagcatg
agcagccaggtggaccagctggactactgggagagcggggagtggttcatcgtcagcgcc
acaggcaagtacaacatcaagaaatacgaatgctgcgtggagtcctaccccgacatcacc
tacttctttatcattaagagactccctttgttctacaccatcaacctgattatcccctgc
ctactgatctcctgcttgacagttctggtgttctatctaccatcagactgcggtgagaag
atcaccctctgcatttcggtgttgctgtcattaaccgtgttcctgctactcatcacggag
ataatcccctccacttctctggtaatacccttgattggagagtacttgctcttcactatg
atctttgtgaccttgtccatcgtcatcacagtctttgtactcaacgttcaccaccgatct
cctcgtacgcataatatgcccgcctgggtgaggagggtctttctcgatgtcataccacgc
ctcctatttatgaaacgaccttcaacaatgaaagaaaactgtaagaaactaattgagttg
atgcacaagaagaacaactcgcccaggtacttgtcagatatcgagacggaaccaagcttc
gctgccacgccatctgacagccaacagagcaaagacccgtccccgacctctcccttctgc
caccacattgatgactcctcaaggcctcagtcaatctgtaagtcaccttctgaccagtac
tctgttctgcatgaagagccaactgaagccagttgcccgtcaccgtcatctcagcaccac
cattttgctgaggatcagtcatcttccccctcgaaaggaaggtctttaagcgttgaatac
accttcaacaccagcgaccttcctcagccgaacacccgctgcaggtctagaagttttcag
tactgtcacatccacgaagagtctgcccagctgaacggccacggcaaatccccagcgtct
caacacggccacgtccttgaggatcagtcccaaagcaaacctccccagtgcaagtgtaat
cgtaaaaagatcagtgcggcagcaatttcgtcaagccgctccttgaaaagtctcagcacc
aaagaccaacaccttctgctgatgtctcctgcaatgaagttagcagtagaaggggttcag
tacattgcagaccacttgaaggcagaggacgctgatatttctgtgaaggaagattggaaa
tatgtagccatggtcattgaccgaatcttcctgtggatgttcatcatagtttgcctgttg
ggaacagtgggcctcttcctcccaccttggctggccgggatgatctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system