KEGG   Latimeria chalumnae (coelacanth): 102352820
Entry
102352820         CDS       T02913                                 
Symbol
SSBP1
Name
(RefSeq) single stranded DNA binding protein 1
  KO
K03111  single-strand DNA-binding protein
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03030  DNA replication
lcm03430  Mismatch repair
lcm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    102352820 (SSBP1)
   03430 Mismatch repair
    102352820 (SSBP1)
   03440 Homologous recombination
    102352820 (SSBP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lcm03032]
    102352820 (SSBP1)
   03400 DNA repair and recombination proteins [BR:lcm03400]
    102352820 (SSBP1)
   03029 Mitochondrial biogenesis [BR:lcm03029]
    102352820 (SSBP1)
DNA replication proteins [BR:lcm03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    102352820 (SSBP1)
DNA repair and recombination proteins [BR:lcm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     102352820 (SSBP1)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    102352820 (SSBP1)
Mitochondrial biogenesis [BR:lcm03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    102352820 (SSBP1)
SSDB
Motif
Pfam: SSB
Other DBs
NCBI-GeneID: 102352820
NCBI-ProteinID: XP_014340790
Position
Un
AA seq 148 aa
MFRRPTVQIIRQFVRHESVDTASLVLERSLNRVQLLGRVGQDPVLRQVDGKNPVTIFSLA
TNEMWRSGEGEVFQTGDISQKTTWHRISIFRPGLRDVAYQYVKKGARVYVEGKVDYGEYV
DRNNVRRQATTIVVDNLIFLSDNVRDKV
NT seq 447 nt   +upstreamnt  +downstreamnt
atgttcagaagacctacagtgcagataattcgtcagtttgtacgacatgaatctgttgat
acggcttctctcgttcttgaaagatctttgaaccgcgtgcagcttctcggccgggttggg
caggaccccgtactgaggcaagtcgatgggaagaaccccgtgaccattttctcgctggcg
accaatgagatgtggcggtctggggagggggaggtgttccagaccggagacattagtcaa
aagacaacatggcacagaatctccatcttcaggccaggactaagagatgtggcataccag
tatgtgaagaagggagctcgggtctacgtagagggaaaggttgattatggcgaatacgta
gacaggaacaacgtgaggcggcaggccacaacgatagttgtcgacaaccttatatttctc
agcgataacgtgagggacaaggtttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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