KEGG   Latimeria chalumnae (coelacanth): 102353937
Entry
102353937         CDS       T02913                                 
Symbol
EXOSC5
Name
(RefSeq) exosome component 5
  KO
K12590  exosome complex component RRP46
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102353937 (EXOSC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcm03019]
    102353937 (EXOSC5)
Messenger RNA biogenesis [BR:lcm03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     102353937 (EXOSC5)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 102353937
NCBI-ProteinID: XP_014349115
Position
Un
AA seq 217 aa
METGGAGCALRPFGCEQNLLSRPDGSATFVQGDTTVLAGVYGPAEVKFSKEIYDKATVEV
ILKPKVGMAAISEKIKEQMIRKTCEAVILTALHPRTSVTVILQIVHDAGALLSCCLNAAC
MALMDAGLPMKSLFCGVSCGIDLDKNILLDPVAKQEKECRSLLTFAIDSTENKVLMSSTS
GTYSIEELQHCIATCQKAAEKIFQFYRDSVRRKYSKS
NT seq 654 nt   +upstreamnt  +downstreamnt
atggagacgggcggagcgggctgcgcgctcaggccgttcgggtgcgagcagaacctgctc
tcccgacccgacggctccgccaccttcgtgcaaggagatacaacggtcttggctggagta
tatggaccggcagaagtgaagttcagtaaagagatctacgacaaagcaacggtggaggtg
atcttgaaaccaaaagtaggaatggcagctataagcgagaagattaaggagcagatgatc
agaaagacgtgtgaagctgtgattctgacggccctgcacccccggacctctgtcactgtg
attctgcagattgtccacgacgccggtgctctgctgtcctgttgtttaaacgctgcttgc
atggccctgatggatgctggtctcccgatgaagtccttgttctgcggggtttcgtgtggc
attgatctcgacaagaacatactgctcgatcccgtagccaaacaggaaaaggaatgtcgg
tcccttctgacctttgcgatagacagcactgagaacaaggtgctgatgtcctcaacgagt
ggtacctacagcatagaagagctgcagcactgtatagctacctgtcagaaagcagcggag
aagatttttcagttttatagagacagcgtcagaaggaaatactcgaaatcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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