KEGG   Latimeria chalumnae (coelacanth): 102355435
Entry
102355435         CDS       T02913                                 
Symbol
PDGFB
Name
(RefSeq) platelet derived growth factor subunit B
  KO
K17386  platelet-derived growth factor subunit B
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04010  MAPK signaling pathway
lcm04020  Calcium signaling pathway
lcm04510  Focal adhesion
lcm04540  Gap junction
lcm04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    102355435 (PDGFB)
   04020 Calcium signaling pathway
    102355435 (PDGFB)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102355435 (PDGFB)
   04540 Gap junction
    102355435 (PDGFB)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    102355435 (PDGFB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:lcm04052]
    102355435 (PDGFB)
   00536 Glycosaminoglycan binding proteins [BR:lcm00536]
    102355435 (PDGFB)
Cytokines and neuropeptides [BR:lcm04052]
 Cytokines
  Growth factors (RTK binding)
   102355435 (PDGFB)
Glycosaminoglycan binding proteins [BR:lcm00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   102355435 (PDGFB)
SSDB
Motif
Pfam: PDGF
Other DBs
NCBI-GeneID: 102355435
NCBI-ProteinID: XP_006010624
Ensembl: ENSLACG00000002600
Position
Un
AA seq 195 aa
MLCFFFSPVDVDSPDPYVNFSKNSHKSSSSLSRVERSLDPSAERAVLAECKTRTEVFEIP
RSLVDPTNANFLVWPTCVEVQRCSGCCNSKVMQCRPTQVLQRHLQVNKVQYVKGKTVIQS
VVVEVEDHVKCRCESVFPSPWHTSPSGSRRTEAISTGMSAPASVTRRREHREKKSKHRIF
KHYRGKKGHRDSFKT
NT seq 588 nt   +upstreamnt  +downstreamnt
atgttatgtttttttttctctcctgtagatgtggattctccagacccttacgtgaacttc
tccaaaaatagtcacaaaagtagctcttcactatccagagtggagcggagtttagatcca
tcagcggagcgggcagtgctagcagaatgtaagacgcggacggaagtcttcgagatcccc
cgcagcctggtggaccccacaaacgccaacttcctggtgtggcccacctgtgtggaggtg
cagcgctgctctggctgctgcaactccaaggttatgcaatgtaggcccacccaggtcctt
cagcgccacctgcaggtgaacaaggtgcagtacgtgaaagggaaaacagtcatccagagt
gtggtggtagaggtggaggaccatgtgaagtgtcgctgtgaatccgtcttcccgtcccca
tggcacacctcccccagcggctctcgccgcacagaagccatttcaacaggcatgtcggca
cctgccagtgtcacaaggcgcagggaacaccgtgaaaagaaaagcaaacatcggatattc
aagcactatcgggggaagaaaggccacagggactccttcaagacatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (29)   

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