KEGG   Latimeria chalumnae (coelacanth): 102359302
Entry
102359302         CDS       T02913                                 
Symbol
SNX5
Name
(RefSeq) sorting nexin 5
  KO
K17920  sorting nexin-5/6/32
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    102359302 (SNX5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcm04131]
    102359302 (SNX5)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:lcm04990]
    102359302 (SNX5)
Membrane trafficking [BR:lcm04131]
 Endocytosis
  Macropinocytosis
   Sorting nexins
    102359302 (SNX5)
Domain-containing proteins not elsewhere classified [BR:lcm04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   102359302 (SNX5)
SSDB
Motif
Pfam: Vps5 PX BLYB LcrG
Other DBs
NCBI-GeneID: 102359302
NCBI-ProteinID: XP_005992984
Ensembl: ENSLACG00000011883
Position
Un
AA seq 397 aa
MASTLEDDNSKLRSVSVDLNIDPSLQIDIPDALSERDKVKFTVRTKTTLPVFQKPEFLVT
RQHEDFIWLHDTLVETEEYAGYIIPPAPPKPDFDAPREKMQKLGEGEGSMTKEEFLKMKQ
ELEAEYLAVFKKTVAVHEVFLQRLTSHPAFSRDHNFQVFLEYDQDLSVRRKNAKEMFGGF
FKSMVKSADEVLISGIKEVDDFFDQEKTFLVDYYNKIKDSTAKADRMTRSHKNVANDYIH
VSACLCSLAIEESTALKKYLLSLAELFEKLRKVEGRVSSDEDLKLSELLRYYMRDIQAAK
DLLYRRARSLADYENSNKALDKARLKSKDVQQAEKQQQDCCEKFELLSKSAKQELTSFKG
RRVSAFRKNLIEMTELEIKHAKNNISLLQGCICLLKN
NT seq 1194 nt   +upstreamnt  +downstreamnt
atggcatccaccctggaggatgacaatagcaagctgaggtctgtatctgtagatctgaac
attgacccctccctccagattgacattcctgatgctctcagtgagagagataaagttaag
tttacagtgcgcacaaagacaacattacctgttttccaaaagccagaattcttagtaacg
cgacaacatgaagacttcatctggttacacgatacccttgttgaaacagaggagtatgca
ggatatattattcctccagcccctccgaagcctgactttgatgctcccagagagaagatg
cagaagctgggagaaggggagggctccatgacaaaagaagagtttctcaaaatgaagcaa
gaacttgaagcggaatatctggctgtttttaagaagactgtggctgtccatgaagttttt
ctccagcggctcacttctcatcctgccttttccagggaccataatttccaggttttcttg
gaatatgaccaggatttaagtgttcgaaggaagaatgcaaaggaaatgtttggtggcttc
tttaagagtatggtaaaaagtgcagatgaggttctgatttctgggattaaggaagttgat
gatttctttgatcaagaaaagaccttccttgttgattactacaataaaattaaggactcc
actgcaaaagccgatagaatgacaagatctcacaaaaatgtggcaaatgactacattcat
gtttcagcttgtttgtgtagtcttgctatagaagaatcaactgcacttaaaaagtacttg
ctaagtcttgctgagctgtttgaaaaactgcggaaagttgaaggtcgggtttcttcagat
gaagacttaaaattatctgaattattaagatattatatgcgagacatacaggctgcaaag
gaccttctatacagacgagcgaggtcccttgctgactatgagaattcaaacaaagctctg
gataaggcaaggttaaaaagcaaagatgtgcagcaagcagagaagcaacagcaagactgc
tgtgaaaaatttgagctgctttctaagtctgccaaacaagagctgacttcttttaaagga
agaagggtatctgctttccgtaaaaaccttattgaaatgacagaactggaaataaaacat
gcaaaaaacaacatttccctcctccaaggctgcatctgtctgctaaagaattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

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