KEGG   Latimeria chalumnae (coelacanth): 102359655
Entry
102359655         CDS       T02913                                 
Name
(RefSeq) cullin-associated NEDD8-dissociated protein 1
  KO
K17263  cullin-associated NEDD8-dissociated protein 1
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcm04121]
    102359655
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcm04147]
    102359655
Ubiquitin system [BR:lcm04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Multi subunit type E3 associated proteins
    102359655
Exosome [BR:lcm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102359655
SSDB
Motif
Pfam: TIP120 HEAT_EZ HEAT_2 HEAT MMS19_C Adaptin_N UME Cnd1 Vac14_Fab1_bd CLASP_N DUF3385 Xpo1 Tti2 RIX1 Maestro_HEAT VHS Dcc1 UTP20_N V-ATPase_H_C Vps35
Other DBs
NCBI-GeneID: 102359655
NCBI-ProteinID: XP_006011199
Ensembl: ENSLACG00000000272
UniProt: H2ZSD2
Position
Un
AA seq 1230 aa
MASASYHISNLLEKMTSSDKDFRFMATNDLMSELQKDSIKLDDDSERKVVKMILKLLEDK
NGEVQNLAVKCLGPLVSKVKEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPA
SSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILNCL
LPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVDLIEHLLTELSKNESMSTTRTYIQCIAA
ISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEVYLHVTTIINI
CLKYLTYDPNYNYDDEDDDENAMEADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAV
VSTRHEMLPEFYKTVSPALIARFKEREENVKADVFHAYLSLLKQTRPAQSWLCDPDAMDQ
EETPLTMLQSQVPNIVKALHKQMKEKSVKTRQCCFNMLTELVNVLPGALTQHIPVLVPGI
IFSLNDKSSSSNLKIDALSCLYVVLCNHSPQVFHPHVQALVPPVVACVGDPFYKITSEAL
LVTQQLVKVIRPLDQPPFFDATPCIKDLFACTIKRLKAADIDQEVKERAISCMGQIICNL
GDHLGADLPSTLQIFLERLKNEITRLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLR
KNQRALKLSTLFALDILIKNYSDSLTPSMIDAVLIELPPLISESDMHVSQMAISFLTTLA
KVHPSSLSKISGSILTELVGLVRSPLLQGGALSAMLEFFQALVMTGTTNLGYMDLLRMLT
GPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALL
SLGEVGHHIDLSAQPELKSVLLEALSSSSEEVKSAASYALGSISVGNLPEYLPFVLQEIT
GQPKRQYLLLHSLKEIISSASVSGLKPYVENIWVLLLKHCECAEEGTRNVVAECLGKLTL
IDPETLLPRLKGYLASGSAYARSSVVTAVKFTISDHPQPIDPLLKNCIGDFLKTLEDPDL
NVRRVALVTFNSAAHNKPSLIRELLDTVLPHLYNETKVRKELIREVEMGPFKHTVDDGLD
IRKAAFECMYTLLDSCLDRLDIFEFLNHVEDGLKDHYDIKMLTFLMLVRLSTLCPSAVLQ
RLDRLVEPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVAALLTIPEAEKSPLMGEFQS
QISSNPELAAIFESIQKDSSSTSLESMDTS
NT seq 3693 nt   +upstreamnt  +downstreamnt
atggcgagcgcttcctaccacatttccaacctgctggagaaaatgacatccagcgacaag
gatttcaggtttatggctaccaatgacttgatgtctgaacttcagaaagattccattaaa
ttggatgatgacagtgaaaggaaagtggtgaagatgatcttgaaactgctagaggataaa
aatggagaagtgcagaacttggctgttaaatgtcttggcccactggtcagcaaagtgaag
gagtatcaggtggagaccattgttgatactctttgcactaatatgctgtcagataaggag
cagctaagggacatctccagcattggcctgaaaacagtcattggagaacttcctccagct
tctagtggatctgcattagctgccaatgtatgtaaaaagatcacgggacgacttacaagt
gctattgccaagcaagaggatgtgtctgttcagttagaggccttagacattatggcagat
atgctaagcaggcaaggagggcttctggttaacttccatccgtcgattctgaactgcttg
cttcctcagctgacgagcccgagactggctgtaagaaaacgaaccatcattgcactcggc
caccttgttatgagttgtggcaacatagtctttgttgacctcattgagcatctgttgact
gagctgtccaaaaacgagtccatgtcaacaaccagaacctatatacaatgcatagctgct
atcagtaggcaggcaggccaccgaattggtgaatatctagagaagattatccccttggtc
gttaagttctgtaatgtggatgatgacgagttaagggaatactgtatccaagcatttgaa
tcttttgttaggaggtgtcccaaggaagtgtacctccatgttaccacaattattaacatt
tgtcttaagtacttaacctatgatccaaattataactatgacgatgaagatgacgatgag
aacgctatggaagcagatggtggcgatgatgatgatcaagggagtgatgatgagtatagc
gatgatgatgatatgagctggaaggtgcgacgcgcagctgccaagtgcttagatgctgta
gttagcactcggcatgaaatgttgccagagttctacaaaaccgtttctcctgcattgatt
gccagattcaaagagcgtgaagagaatgtaaaagctgatgttttccacgcgtacctttct
ctcttgaagcagactcgtcctgcgcagagctggttgtgtgatcctgatgcaatggatcag
gaggagactccgttaacaatgcttcaaagccaggttccaaacattgttaaagccttgcac
aaacaaatgaaggagaagagtgtgaaaactcggcagtgctgctttaacatgctgacagag
ctagtaaacgtgttacctggagctttaacgcagcacattccagtacttgttccaggtatc
attttctctctcaatgataaatcgagttcatctaacctaaagatagatgcattgtcttgt
ctttatgttgtcctttgcaaccactcgcctcaagtcttccatcctcacgttcaagctcta
gttcctccagttgtggcttgcgttggagatcctttttacaagattacatctgaagcactg
ctagtaacgcagcaacttgtaaaagtcattcgccctctggatcagcctcctttctttgat
gccactccttgcattaaggatttgtttgcctgcaccattaagaggttaaaagctgctgat
attgatcaagaagtaaaagagagggcaatctcctgtatgggtcagatcatctgcaatctc
ggagaccatctcggagcagatttacctagcacacttcagattttcttagagaggctgaag
aatgagatcaccaggcttactacagtcaaggcgttgaccttaattgctggatctcctctt
aagatagatctaagaccagttctgggtgagggagtcccaatccttgcctcattccttagg
aaaaaccagcgggcactgaagctgagcaccctttttgcattggatatcctaattaaaaac
tatagcgacagcctgactccttccatgattgatgctgttctgattgagctacctcctctt
attagtgaaagtgacatgcatgtgtcgcagatggccatcagctttctaaccacattagcc
aaagtgcatccatcttctctttcgaagattagcggttccatccttactgaactggttggg
ctagtacgatcgcccttactgcagggaggagcgcttagtgctatgctagaattttttcaa
gctcttgttatgacaggaacaactaacctggggtatatggatttattgcgcatgctgacc
ggaccagtttattctcaaagtacggcacttacccacaagcagtcctattactccattgcc
aaatgtgtagcagcacttacaagggcttgccctaaggaaggaccagctgtagttgggcag
tttatccaagatgtaaagaattcgaggtctactgattccattcgtcttctggctctgctg
tctctgggagaagttgggcaccatattgacctgagtgctcagcctgaacttaagtctgtg
ctattagaagcattatcttcatctagtgaagaagtcaagtctgccgcatcatatgcgctg
ggtagtattagtgttggcaatcttcctgagtatctgccttttgtgcttcaagagattaca
ggtcagccaaagaggcaatatctcctgttgcattccctaaaggaaattattagctctgca
tcagtaagtggcctcaaaccatatgtggagaatatatgggtcttattgctaaaacactgt
gagtgtgcagaagaaggaacccgaaatgtggttgcagaatgccttggcaagcttacttta
atagacccagaaacattactgcctcgtcttaagggatatttggcatcaggttcagcttac
gctcgaagctctgtggttacagctgtaaagttcaccatttctgaccatccacagccaata
gatcctctgctaaagaactgtataggcgatttcctgaagacattggaagacccagacctc
aatgtacggagagtggcgcttgttacatttaattcagcagcgcacaataaaccatctctg
ataagggagctgctagatactgttcttccccacctttacaatgaaacaaaagtcagaaaa
gaactgataagagaggtagaaatgggaccattcaagcacacagtggatgatggcctagat
atcaggaaggcagcgtttgaatgtatgtatacacttttagacagctgcctggacagatta
gatatctttgagttcctgaaccatgttgaagatggattaaaggaccattatgacattaag
atgttgaccttcttgatgttggtaagactgtctacgctttgcccaagtgcagtccttcag
agattggatcggctggtggaaccattacgcgctacttgcacaactaaggtgaaagcgaac
tcggtgaagcaagaatttgagaaacaggatgagctaaagcgctctgccatgagagcagtg
gcagcgctcttgaccattcccgaagcagagaagagcccgctgatgggtgaattccagtct
cagatcagctcaaacccggagctggcagccatcttcgaaagcatccagaaggactcctcg
tcaaccagtttggagtcaatggacacgagctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (20)   
   Pfam (20)   
All databases (71)   

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