KEGG   Latimeria chalumnae (coelacanth): 102360562
Entry
102360562         CDS       T02913                                 
Symbol
CSPG4
Name
(RefSeq) chondroitin sulfate proteoglycan 4
  KO
K08115  chondroitin sulfate proteoglycan 4
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:lcm00535]
    102360562 (CSPG4)
Proteoglycans [BR:lcm00535]
 Cell surface proteoglycans
  Others
   102360562 (CSPG4)
SSDB
Motif
Pfam: Cadherin_3 Laminin_G_2 Laminin_G_1 Cadherin_4 Big_9 Laminin_G_3 DAG1
Other DBs
NCBI-GeneID: 102360562
NCBI-ProteinID: XP_005994971
Ensembl: ENSLACG00000015010
Position
Un
AA seq 2368 aa
MAPTVAHPSHEKLPKPSKLQGDSQIASFFGDSYVEVITVKASSVELHLQFQTSKGSGLLF
LAAGQTDYLLVELQSGGLQVKLKLGAGEVIVESQAGLKLNNLVLHDVQLTLEGGTLTLTI
DDLFNSSASVPSDQQELSSHDGIFVGGTGELVKPYLAGVTSNFRGCITTVLFNGIDLLLP
LTSQPGIKTVHEVKEGCHNEFVAAEDDPIHFFGQKSFISFPGWNTREEGFVEFIFKSSVR
QALLLYHFGYQTDFIYLGIVDGHLRGAVNNGSGIVTLDSNVYISDNQWHHVRMHINANEF
AIAVNYTTSKINVNNNENKYMDLIGYLHIGGLDDKTLAKLKKSKIAPLLDNSIKSNSFIG
CIKGLRINFEKKSLQDALVTKEIGTVCEEEDYDEDVGYKNFEVLTTSIPPVWQKQTSVPI
TVPCQFSPNLPNVFKNFTKLLDLDLLYVTEGKTAILQWKHIHPTIDLNSIGVRYSQVLFR
VIHDARYGQLKLDIPGARSRGTFTLLDIINQKVRYSHDGSEDSIDQLVFEVIVYSKAELP
DCLKKGQLYTLPVQITSVNDPPTFVFPKGDMILILEHTKKCIGPDNILVVDVDTVCNKLK
IFVTGGPDIEEGYLENAVQPGQNIEEFSCSDLEAGNICYVHKSGYASQFMLQASDGQLQS
EVVTLRMVALDPDLQVGNNTGLIVSQGEAAVITRGDLSVETNAVKQNLDILYIITEPLQF
GKVQKQQIPGHWKDVMSFLQYDIEQGNLRYFSTDSQYHSEDLMEKLQFELRVGEKILPNN
TFFIKIKTAKIKMINMVPLELTNKRQKNITLNDLEAVLEGQTAAHDSFQYKILRAPSKGS
LQLLDHTLLEGSKFLQEDLRNGLLSYTATVRSPEKTEDSFLFQVFVGNQHSPVYTYIIRI
GANPDVPILTNMGLSVLEGGDLIITKNDLFVESLNSMDFLYEVIQGPQHGKLMRLQSWQS
TSAEDITVFTNDDILQKMLIYKHDDSETIEDRIIFTAVKQSESSADFTNEDIESDMVKGV
LKIAVQPKNDEVPVRVVDKVFNIVRYGQRLLTTDDILFTDADSDFSDSQLVFVRRGIPYG
SIVSVEDVQHQLFRFTQEDLRNKKVLFIHKGADRGHFLLQVSEGLHQSSALLEVQASEPY
IKMANTSGLLVHQGGQEPLDTSILSAETNMDIRSESDITYQVTAPPKQGEILIRDQTVSS
FSQEDLMNGRVVYRHDNSRNSRDQVTFLIEANQVSVEETFQIRVALESYEQPPTLVKHEK
IFVFENEAAEIQQDQLMVSHEDSTPSEIVYSVTHQPRYGFLVMVSDSSSSASSSGLDSVQ
TFTQQDIQDGRVLYMHSKADQQVDQFTVDVTNGFKMLEGIQVFIEILPGVIPLETQNITL
EEGSSETLNEDVLTFSNRYFTDLNLEFIILEQPKHGAIRHSGKPENLFFFSWAEVEQGLI
TYMHDGSETQTDGFTIIANATEIDRHSEPMRISVTVTPINDETPVVVVNAGLQLWVNSTA
EITSHLLSTEDQDTPPDQVVYSIQPPSNGKVALKSSPTYSILQFSQTQINQGHVIFTHEG
SLFGGFMFEVSDGSSASSLHFFNVTAKQLVITMETKQDLTVYPGTFHPITSQNLKAVTSG
SGAGDPPQIIFTVTRAPSMGRLVTTDLENNTQEVYNFTQHEVEAGTIFYQHDQPSEPFWI
SQDSFEFIVSSLPAVTEKQMFQILVSFEADVPQHQTRLWNNKGILVMEGENAIIGTSNLD
ASNLLASLPESDRPLYDVVFWVENLPTHGHLSISEDPPYFLQADLNYGKLEYSHDGSETF
EDSFKFRAWLHPRAQAHTVPPLEDSIVISEAFNITIKGLNDNPPQLISQGLSLKVPQGSS
VLLTQDDLNVVDLDNSPQEIKYNIITGPNNGFLVNKENSTIQIKQFTQADVNAAGIMFTS
NGNSSLGSFYFSVTDGKHPPLFILFSIEILPLVVTLDNNKEVEVIQGDNGSFITRDHLRA
KTNGEDKEVTYKITVPVRFGKLMVGKEAAMNFTQKHVDDGQVWFKFTEFTSPVDSFQFLA
QTSEAETSGNVNITVKPLIKMAHNLSWPRGTTVLITTDIMDASELGKRTDGMPTFNITQQ
PLKGQFVKVLGDNKDQTSPVDLFTQKDLEDGIIGLELFEEKEAAPHFQEDSFQFQLLATE
VPPAMVALAFKNVPYIPNVYYNATLLKVPFPLATLMPEASGQSETPEVDINTSASPFFPR
KPGSSRSDFTGYEVFPTSTQPKTETTLPAQEGTHLAFQESSLFYIIIPICIILLLLIIAA
LLALYFVRRNKTGKHNVQATSSKPKNGVAEKETFRKTEHAQTVPMVTVTPLESKGEDSLN
KDEGQVDPELLQFCRTSNPTLKTNQYWV
NT seq 7107 nt   +upstreamnt  +downstreamnt
atggcaccaacagtggcacatccctcccacgagaaactccctaaaccatcaaaacttcag
ggagactcgcagatcgcttctttctttggagacagttatgtggaggtgattacagttaaa
gcaagcagtgttgagctccatctgcagttccaaactagcaagggaagtggactgctcttt
ctggctgcaggccaaacggactatctcttggtggaactccaatctggaggcttgcaggtg
aaactgaagcttggagcaggagaagtaattgtggagtctcaagctggcttgaagctcaat
aatttggtcttacatgatgtccaacttacactggaaggtggaacattgactttaacaata
gatgatctgttcaatagctctgcaagtgttcccagtgatcaacaagaactgagtagtcac
gatggtatatttgtaggaggtaccggggaactagttaaaccctaccttgctggggtgacc
tcaaatttcagaggttgcatcactacagttttgttcaatggcattgatctcttactgcca
ctcacatcccaaccaggcatcaaaacagttcatgaggtgaaggaaggatgtcacaatgag
tttgtagctgcagaagatgacccaatacactttttcgggcaaaagtcattcatctcattc
cctggttggaatacaagagaagaagggtttgttgagtttattttcaagtctagtgtcagg
caagccctattattatatcattttggataccaaactgactttatctacttaggaattgtt
gacggccatttacgtggggctgttaacaatggaagtgggattgtcacattagatagcaat
gtttatattagtgacaatcagtggcatcatgtcagaatgcacattaacgcaaatgagttt
gcaattgctgtaaattatacaacttccaaaataaatgtaaacaacaatgaaaataaatac
atggacttaatagggtatcttcacataggaggtcttgatgacaaaactctagctaaacta
aagaaaagtaaaatagcccctttgctggataacagtattaaaagcaattcctttattgga
tgtataaaaggcctaagaataaactttgagaagaaaagccttcaggatgcattggttaca
aaggagattgggacagtttgcgaagaggaagattatgatgaagatgttggttacaaaaat
tttgaagtgcttacaacttctattccgcctgtctggcaaaaacagacgtcagtaccaatt
acagtaccctgtcagttcagcccaaaccttccaaatgtttttaaaaactttaccaagctg
ttggacctggacctactatatgtgacagaagggaaaacagccattttacaatggaagcat
atccatccaaccatagacctaaatagcatcggtgtaagatattcccaggttctgtttagg
gtcattcatgatgccagatatggacaactcaaactagatattccaggagctagaagcaga
ggaacatttactctcttggacatcataaaccaaaaggtcaggtacagccatgatggctct
gaagactcaatagaccagcttgtgtttgaggtcattgtttatagtaaagcagagctccca
gattgtttgaaaaagggccaattgtacactcttcctgtacagatcacttcagtcaatgat
cctcctacatttgtcttcccaaaaggggatatgatcctcatcctagagcacacaaagaag
tgtattggccctgacaacatccttgtggttgatgtagatacagtgtgcaataaattaaag
atttttgtaactggtggtcctgacattgaagaggggtatttagaaaatgctgttcaacca
gggcaaaacatagaggaattttcatgcagtgacctagaagctggtaatatctgctatgtc
cataaaagtggttacgcatcccagttcatgcttcaggcttctgatggacaattacaaagt
gaagttgtgactttaagaatggttgcattggaccctgatttgcaagtgggaaacaatact
ggtttgattgtgtctcaaggtgaagctgctgttatcactaggggtgacttatctgtggag
accaatgcagtaaagcaaaacttagacattctttatattatcacagagcctttacagttt
ggtaaggtacaaaaacaacaaattcctggacactggaaagatgtcatgtccttccttcaa
tatgacatagaacaagggaatcttaggtatttcagcacagattcccaataccatagtgaa
gatttaatggagaaattgcaatttgaacttcgagttggagagaaaatcttaccaaacaat
acctttttcatcaaaattaaaactgccaaaataaagatgatcaatatggttcctcttgaa
ctaaccaacaagcgacagaaaaacatcactctaaatgatctagaagctgtcttagaaggg
caaactgcagctcatgattcatttcagtacaaaattctaagagctcctagtaaaggatct
ttacagttgctggatcacaccctactagagggctctaaatttcttcaggaagatttaagg
aatggtcttctcagctatactgcaacagttagaagtcctgaaaaaacagaagatagtttc
ttgttccaagtgtttgttggcaaccagcattcaccagtttatacctatataattaggatt
ggtgccaatcctgatgtacctattttgacaaatatgggtttgtctgtactagaagggggt
gacctaatcatcacaaagaatgatctgtttgtagaaagcttgaatagcatggattttctg
tatgaggtcattcaggggccacaacatgggaaattaatgcgacttcaatcatggcaaagt
acatctgctgaggatatcactgtttttactaatgatgacattctgcagaagatgctgata
tacaagcatgatgactctgaaaccattgaggacagaataatcttcacagcagtgaagcaa
tctgagagcagtgccgacttcacaaatgaagacattgagtctgacatggtgaaaggtgtc
ttgaaaatagcagttcaacctaagaatgatgaagttcctgtccgagtagttgataaggtt
tttaacattgttagatatggacagcgtttgctaaccactgatgatatattgttcacagat
gctgattcagatttttcagactcccaactggtttttgttcgaagaggcattccctatggt
agcattgtctctgttgaagatgttcagcatcaattgtttcgatttactcaggaagacctg
agaaataaaaaggtgcttttcattcataaaggagctgatcgtggccatttcctgttgcaa
gtgtctgagggcctccaccagtcctcagctcttctggaagttcaagcttcagagccatat
atcaagatggccaacacttctggccttcttgttcaccaaggaggccaagaacctttagac
acctccatcctgagtgcagagacaaacatggacatcagaagtgaaagtgatattacatat
caagtgactgccccaccaaagcaaggagaaattttaatacgagatcaaacagtgtcctca
ttttcccaggaagacctcatgaatgggagggtggtgtaccgacatgacaacagcagaaat
tccagagaccaggtcacctttctaatagaagctaatcaagtttcggtggaagaaacattt
caaataagagttgctttagaaagttatgagcagccaccaactctggtcaagcatgagaaa
atctttgtgtttgaaaatgaagcagctgaaattcaacaggatcagttaatggtttcccat
gaagacagtactccctcagagattgtctattctgtgactcatcagccacgctatgggttc
ttggtgatggtctctgatagctcctcctctgcttctagctcaggcttggattcagtgcag
acattcacccagcaggacatacaagatggcagagtcctctacatgcactccaaagcagat
cagcaggttgaccagtttactgtggatgtgaccaatgggtttaagatgctagaaggaatt
caagtctttattgagatccttccaggcgtaattcccttggagacccagaatataacactt
gaagaaggaagctctgaaactcttaatgaagatgtcttgacattttccaatagatacttc
acagatttaaatctggaatttattattttagagcagccaaaacatggagctataaggcac
agtgggaagcctgaaaacctttttttcttctcctgggctgaggttgagcagggtttgatc
acctacatgcatgatgggagtgagacgcagacagatggcttcaccattattgcaaacgcc
acggagattgacaggcatagcgagccaatgagaatctctgtcacggtgacacccatcaat
gacgaaacaccagtggtagtggtcaatgctggattgcagttatgggtcaactctactgct
gaaataacctcccatttactgagcactgaagaccaggacacccctcctgaccaagtggta
tattccatccagcctccatccaatgggaaggtggcactgaagtcctctcctacttacagt
atcctccagttctctcagacacagataaatcaggggcatgttattttcacacatgaaggg
tccctttttggaggattcatgtttgaggtatctgatgggagcagtgcatcatcacttcat
ttttttaacgtaactgccaagcagctggtcattaccatggaaaccaaacaggacctgact
gtgtatccaggaacctttcaccccatcacgagtcagaacctgaaagcagtgaccagcggt
agtggagctggagatccacctcagatcatattcacggtcacgagggctccaagtatggga
aggttagtgacaactgacctggagaataacacgcaggaagtttacaacttcactcaacat
gaggtggaagctggaactattttttaccaacatgaccaacccagtgagccattttggatt
tcccaggattcctttgaattcatagtctcttccctgcctgctgtgactgagaagcagatg
tttcagattctggtctcctttgaagctgacgttcctcaacaccaaacccgcttgtggaac
aataaaggaattttggttatggaaggtgaaaatgctattataggtacatcaaacctggat
gcttcaaacttgctggccagccttcctgagtccgacagaccactctatgatgtagtattc
tgggtggaaaatttgccaacccatggacacctctctatcagtgaagaccctccttatttc
ctacaagcagatttgaattatggcaagttggaatacagtcatgatggctctgaaaccttt
gaagacagcttcaaatttagagcttggttgcaccccagggctcaggcccatactgtgcct
ccactggaagacagtattgttatttctgaagcttttaacataaccattaaaggactaaat
gacaacccacctcaactaatctcacaaggccttagtctgaaagtccctcaaggttcaagt
gtattgctcacacaagatgacttgaatgttgtggaccttgacaattcccctcaggaaatc
aagtacaacattatcactgggccaaacaatggtttcttggtcaacaaagagaacagcacc
atacagattaagcaattcactcaggcagatgtcaatgctgctgggataatgttcaccagt
aatggcaacagttctcttggttcattttacttcagtgttactgatggaaagcaccctccc
ctcttcatattattctccattgaaatcttgccgctggtggtcactttggataacaacaag
gaggtggaggtgatacaaggagacaatggatccttcatcacaagagatcatctcagggcc
aaaacaaatggagaagataaagaagtgacctacaagattacagtccctgtcaggttcgga
aagctgatggttggcaaggaggctgcaatgaatttcactcaaaaacatgttgatgatggg
caagtttggttcaagttcacagagttcacttcccctgtagacagtttccagtttctagca
cagactagtgaagctgaaacttcagggaatgtaaatattacagtgaaacctctaatcaag
atggcgcacaatctctcgtggccaaggggaacaacagtattgattaccactgacataatg
gatgctagtgagctgggtaaaaggactgatggtatgcctactttcaatattacccagcag
cctttaaaagggcagtttgttaaagtactcggtgataataaagatcaaacctcacctgta
gatctcttcactcagaaagatctcgaagatgggataataggacttgagttattcgaagaa
aaagaggctgcccctcactttcaagaggacagtttccaattccagctgctagctactgaa
gtgccaccagctatggttgcactagcttttaaaaatgtaccctatattcctaatgtctac
tacaatgcaactttgcttaaggtcccttttcccttagcaacattgatgccagaagcaagc
ggccagtcagaaacaccagaagtggatataaacacatctgcttcacccttcttcccaagg
aaaccaggtagctccaggtctgactttacaggttatgaggttttcccaacatcaacccag
cctaaaacggaaactacacttccagctcaggaggggacccaccttgcttttcaggaaagc
agcctcttctatatcatcattccaatctgcataattcttttgttattgataatagctgcc
cttttagctctttactttgtcaggcgcaacaaaacagggaagcacaatgtgcaggccacc
tcttccaagcccaagaatggggtggcagaaaaggagacattcaggaagactgagcatgcc
cagacagtccccatggtaacagtgaccccattagaatctaaaggtgaagattcactgaac
aaagatgaaggacaggttgatcctgaactgttgcagttttgcaggacctcgaatcctacg
ttaaaaactaaccagtattgggtctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   KEGG ORTHOLOGY (1)   
   RefGene (45)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (62)   

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