KEGG   Latimeria chalumnae (coelacanth): 102362170
Entry
102362170         CDS       T02913                                 
Symbol
SCN8A
Name
(RefSeq) sodium voltage-gated channel alpha subunit 8
  KO
K04840  voltage-gated sodium channel type VIII alpha
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:lcm04040]
    102362170 (SCN8A)
Ion channels [BR:lcm04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   102362170 (SCN8A)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc Na_trans_cytopl PKD_channel GPHH ATP-synt_B IQ Neur_chan_memb
Other DBs
NCBI-GeneID: 102362170
NCBI-ProteinID: XP_014339277
Position
Un
AA seq 1979 aa
MAAPLLAPPGPDSFRPFCRESLAAIEKRIAEEKAKKPPKPDSSHRDDDEENKPKPNSDLE
AGKSLPFIYGDIPPRLVAEPLEDLDPFYINQKTFIVLNKGKAIFRFSATPALYIISPFNL
LRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKQVEYTFTGIYTFESVVKIIAR
GFCIDSFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLKQKCVVWPIDINDTYLGNGSKGF
DWDTYIMNDTNFYFIPGAIDALLCGNASDAGQCPEGYMCMKAGRNPNYGYTSFDSFSWAF
LALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMATSAGTVSEDAVEDDGGGRMSRSSSELSK
LSSKSAKERRNRRKKKKQKEQSEGEEKGDNEKIVKSESDDGIKRKFRLPDNRLGRKFSIM
NQSLLSIPGSPFLSRQPSRNSIFSIKGRSKDAGSENEFADDENSTVEESEGRRDSLFIPI
RPDRRNSYSGYSPESRTSRIFPVPPHNVKRNSTVDCNGVVTLLPGGRLLPEVIIDKAATD
DNSPTTEVEVKKKHSGSLLVSMDQLNTSFGRKDRANSVLSVLTNTLVEELEESQRKCPPC
WYKFANTFLIWECSPTWLKVKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFE
HVLLVGNFVFTGIFTAEMFLKLVAMDPYYYFQEGWNIFDGFIVSLSLMELGLQDVEGLSV
LRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYK
DCVCKINPECELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLTVFMMVMV
IGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWLKLRVHNFIQAH
FKKRATDEVKPLEDMYDKKVNCIANHTGADINREMDYQKNGNGTTSGIGSSVEKYIIDED
HMSFIHNPNLTVRVPIAVGESDFENLNTEDFSSESDVEGSKEKLDDTSSSEGSTIDNKPD
EEEIPVEQPEEYLDPDACFTEGCVQRFKICQVSVEEGLGKSWWTLRKTCFLIVEHNWFET
FIIFMILLSSGALAFEDIYIEQRRTIRTMLEYADKVFTYIFIVEMLLKWIAYGYVKFFTN
AWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVG
AIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHFCYNETLGDKVPLDLVQNKSDCYKFIEA
NYSDVRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKVDQQPIYEDNIYMYM
YFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQK
PIPRPLNPIQGAVFDFVTQQAFDICIMILICLNMVTMMVETDDQSDQTEVVLYWVNFIFI
IVFTSECVLKLFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIERYFVSPTLFRVIRLA
RIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHEAGI
DDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDIDKEHPGSHVKGDCGNPSVG
IFFFVSYIIVSFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPHATQF
IEYKKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGEL
DVLRQQMEERFVASNPSKVSFEPITTTLRRKQEIVSAVIIQRWYRRHLVARGFVCQRKSA
TTKLENGGTNQEKKEGTPSTASLPSYDSVTKPEKEKQENEERGKRQRGKNQKDVRESKC
NT seq 5940 nt   +upstreamnt  +downstreamnt
atggcagcaccactgcttgcaccaccaggccctgacagttttcgccccttctgccgtgag
tctttggctgccattgagaaacgcattgctgaagaaaaagccaagaaaccaccgaagcca
gacagtagccaccgagacgatgatgaggaaaataaaccaaaaccaaacagcgacctggag
gcaggaaaaagtctgcctttcatctatggtgatatccctccacgcttggttgctgaacca
ttggaggacttggaccctttttatataaaccagaaaacctttatagtactaaacaaagga
aaagcaatcttccgatttagtgccacgcctgccttgtacattataagtccttttaatcta
cttaggagaatagctattaaaattttgatacattcagtattcagcatgatcattatgtgc
actattttgaccaactgtgtattcatgacttttagtaatcccccagaatggtctaagcaa
gtagagtacacattcactggtatttatacatttgaatctgttgtaaaaattattgcaaga
ggcttctgcatagacagctttacttttctgagggacccatggaactggctcgacttcagt
gtcatcatgatggcatatgtgacagagtttgtggaccttggcaatgtctcagcgttgaga
acattcagagttctccgagctttgaaaactatctctgtcattccaggtctaaagaccatt
gtgggagccctgattcagtctgtgaagaaactttcggatgtaatgatcctgacagtgttc
tgtctgagtgtctttgctttaattgggctgcagcttttcatgggcaacctgaagcaaaaa
tgtgtagtgtggccaattgatataaacgatacttatcttggaaatggatccaaaggcttc
gactgggatacgtacatcatgaatgatacaaacttctactttattcctggagccattgat
gcactgctttgtggaaatgcttcagacgctggccaatgccctgagggatacatgtgtatg
aaagcaggaaggaatcccaattatggctacaccagctttgactcctttagctgggccttt
ttggctttgtttcgccttatgactcaggacttctgggaaaacttgtaccaacttactttg
cgggcagcaggaaaaacctacatgatcttttttgtgctggttatctttgtggggtctttc
tacctggttaatctgatcctggctgtggtagccatggcttatgaggagcaaaaccaggct
acgttagaagaggctgagcagaaggaggcagagttcaaagctatgctggaacaactgaag
aagcagcaagaggaggcacaggctgcagccatggcaacgtcagcagggacggtttctgag
gacgcagttgaagatgatggaggggggagaatgtcccgtagctcctcagaattgtccaag
ctcagttcaaagagtgccaaggagaggaggaacaggaggaagaagaagaaacagaaggaa
cagtctgaaggggaggagaaaggagacaatgaaaagattgtcaaatctgaatctgatgat
ggcattaaaagaaagtttaggcttccagataaccgattaggaaggaagttctctataatg
aatcagtcactgctcagcatacctgggtctcctttcctctccagacaacctagcagaaac
agtattttcagcatcaagggtcgatcaaaagacgctgggtcagaaaatgagtttgcagat
gatgagaacagcacggtagaggaaagtgaaggcaggagagactcgctgtttatccccatc
cggcctgacaggagaaacagctacagtggctacagcccggagagccggacgtccaggatc
ttcccagtcccaccccacaatgtgaagaggaacagcacagtggattgcaatggcgtggtc
accttgctgcctggcggacgtctactgcctgaggtgataatagataaggcagctactgat
gacaatagccctactactgaagtagaggttaaaaagaaacattcaggctctctcctggtt
tcgatggaccagctgaacacatcttttggaagaaaggacagagcaaatagcgtgttaagt
gtattgactaatacactggtagaggaactggaagaatctcagcggaagtgccctccctgc
tggtataagtttgcaaacacctttttgatctgggaatgttccccaacatggctgaaagtg
aaggagattgtgaacctgattgtgatggatccctttgtagacctggcaatcaccatctgt
attgtactgaacaccctcttcatggctatggagcaccaccccatgacaccgcagtttgag
cacgtcctgttagttggaaactttgtgttcacagggattttcaccgctgaaatgtttttg
aagcttgtagcaatggatccctattattattttcaagaaggttggaacatctttgatggg
tttattgtcagtcttagtttaatggagctgggtcttcaagacgttgaaggtctctctgtc
ctgcgatcattccgattgctgagagtcttcaagctggcaaaatcatggccgactctgaac
atgttgattaagattattggtaactctgtgggtgctctgggaaacttgaccttggtgctg
gccatcattgtgttcatctttgcagtggtgggcatgcagctctttggtaaaagctacaag
gactgtgtctgtaaaatcaatccggagtgtgagcttccccgctggcatatgaatgacttc
ttccactcgttcctcattgtgttccgcgtgttgtgcggagagtggattgaaaccatgtgg
gattgtatggaggttgcaggacagactatgtgcttgactgtcttcatgatggtcatggtc
attggaaacttagtagtgttgaacttgttcttagccttgctgctgagctctttcagcgca
gataatctagcagctacagatgatgatggagagatgaacaacctgcagatctcagtcata
aggataaagaagggaatcgcctggctgaagctcagagtacacaacttcatccaggcacat
ttcaaaaagagagcaacagatgaagtcaaaccactagaagacatgtatgataagaaagtg
aactgtattgctaaccacacaggagctgatattaacagggaaatggactatcagaagaat
ggaaatggcactaccagtggtattgggagtagtgtggaaaaatatatcattgatgaagac
cacatgtcctttatacacaaccctaacctgacagtgagggttcctattgctgttggagag
tcagattttgaaaacctgaatacagaagattttagtagtgagtcagatgtagaaggaagc
aaagagaaactggatgatacaagctcttctgagggcagtaccattgataacaaaccagat
gaagaagaaatccctgtagaacaaccagaagagtacttagatccggatgcctgcttcact
gaaggatgtgtacaacgttttaagatatgtcaggtcagtgtcgaagaaggcttgggcaag
tcttggtggaccctgagaaaaacctgcttcttgattgtggaacacaactggtttgaaacc
tttatcatcttcatgatcttgctcagcagtggtgcactggcctttgaggacatttacata
gagcagaggagaaccatcagaactatgctggaatatgctgacaaggtctttacgtacatc
ttcattgtggaaatgttactgaagtggatagcatatggatatgtgaaattctttaccaat
gcatggtgttggctggacttcctcattgtagatgtctctttagtcagccttgtagctaat
gccctgggctactcggaactaggtgccattaagtcccttaggacactaagagctttgaga
cccttaagagccttgtcacgatttgaagggatgagggtggtggtcaatgctttggttggt
gccatcccttccattatgaatgtgctgctggtctgcctcatcttctggctgattttcagt
atcatgggggtcaacctgtttgctggaaagtaccatttttgctataatgaaactttaggg
gataaggtcccccttgacttagtacagaacaaaagcgattgttataaattcatagaggca
aactattcagatgtcagatggaaaaatgtgaaaattaactttgacaacgtcggggctgga
tatcttgctttactacaagtggccacctttaaaggctggatggacatcatgtatgcagct
gtggattcaagaaaggttgaccagcaacctatctatgaagataacatctacatgtacatg
tattttgtgatttttatcatctttggatcattcttcactctcaaccttttcattggtgtc
atcatcgacaacttcaatcaacaaaagaaaaagtttggaggtcaggatatattcatgaca
gaagagcaaaagaagtattacaatgcaatgaagaaactgggctctaagaaacctcagaaa
cccattcctagacctttaaatcctatccaaggagctgtctttgactttgttacccagcaa
gcttttgatatttgcatcatgatccttatctgcctcaacatggtgactatgatggtggag
acagatgaccagagtgaccagactgaagtcgttctctattgggttaacttcatcttcatt
attgtcttcaccagtgagtgtgtactcaagctcttcgcattgaggcattactacttcaca
attggatggaacatttttgactttgtggttgtaattctctccattgtaggaatgttcctg
gctgatatcattgagagatactttgtgtcaccgactctcttcagagtgattcgattggct
cgtattggtcgtatcctgcgtctgattaaaggggccaaaggaatccgaacactgcttttt
gccttaatgatgtctttgcctgccttgtttaacattggtcttctgttgtttctggtcatg
ttcattttttccatatttggaatgtctaattttggctatgtgaagcatgaagctggaatc
gatgatatgtttaactttgaaacgtttggaaacagtatgatctgtttgttccagatcact
acttcagctgggtgggatggtttgctgttgccaatcttaaacagaccaccagactgcgat
attgataaagagcatcctgggagtcatgtcaaaggagactgtggaaacccatctgtggga
atatttttctttgtgagttacatcattgtatctttcctgattgttgtgaacatgtacatt
gccattattttggagaacttcagcgtggccactgaggagagtgcagatccattgagcgaa
gatgattttgagaccttttatgagatttgggagaagtttgatccacacgcaactcagttt
attgagtacaagaaattggctgactttgccgatgccttggagcatcctcttcgagttcct
aaacccaacactattgaactcatcgccatggacttgcccatggtgagcggagataggatt
cactgtttagatatcctttttgcattcaccaagcgtgtgcttggtgatagtggagaactt
gatgttctgaggcaacagatggaagagaggtttgtggcgtccaatccttccaaggtctct
tttgagccaatcacaaccacactaaggcgcaaacaggaaattgtctcagcagtcattatt
cagagatggtacaggcggcacctagtagcgaggggctttgtgtgccaaaggaagtctgcc
actacaaaactagagaatggaggtaccaatcaagagaaaaaagagggcactccctccact
gcatcgctgccttcctacgacagtgtaactaagccagaaaaagagaaacaagaaaacgaa
gaaaggggtaaaagacagagaggcaaaaaccaaaaagatgtcagggaatctaagtgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (48)   

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