KEGG   Latimeria chalumnae (coelacanth): 102364268
Entry
102364268         CDS       T02913                                 
Name
(RefSeq) integrin alpha-5-like
  KO
K06484  integrin alpha 5
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03266  Virion - Herpesvirus
lcm04145  Phagosome
lcm04510  Focal adhesion
lcm04512  ECM-receptor interaction
lcm04810  Regulation of actin cytoskeleton
lcm04820  Cytoskeleton in muscle cells
lcm05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    102364268
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102364268
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102364268
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102364268
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102364268
   04810 Regulation of actin cytoskeleton
    102364268
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102364268
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcm04147]
    102364268
   04515 Cell adhesion molecules [BR:lcm04515]
    102364268
   04090 CD molecules [BR:lcm04090]
    102364268
Exosome [BR:lcm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102364268
Cell adhesion molecules [BR:lcm04515]
 Integrins
  Integrin alpha subunits
   102364268
CD molecules [BR:lcm04090]
 Proteins
  102364268
SSDB
Motif
Pfam: Integrin_A_Ig_1 Integrin_A_Ig_3 Integrin_A_Ig_2 FBPase_3
Other DBs
NCBI-GeneID: 102364268
NCBI-ProteinID: XP_006013736
Position
Un
AA seq 641 aa
INLSFCLNVSGKHLPDSIGFNLEIQLDKLKQKGAVKRALFLDSHQPYFQKRILIQNGAGE
ACDEMKIYLREDSEFRDKLSPIYISMNFSLDPHAPADMHGLQPLLNYLTKNVIEQKAFIQ
LDCGEDNICVPDLHLTVSGDRGEVYLGDENALILTFGAENKGEGGAYEADLYVILPPEAE
YSGVVRNNELLAGLRFTVPHLRDNKKTVHFELQIRSKNENNSRSELVVYSLDVAVLAKIL
FHGVSNPENVMFPFPNWKPSKKPVTEQDIGPSVEHVYELVNNGPSWISHSILEVRCPIRF
QSNELMYVIQYTPDRLMDCTSTPHLDPLNVKVQNSPTEQVLVLAQKQANHVQKREAPRDN
LWNTDTLSSPASTPARPHPFVLNRDTVKPSEYTCAHPFILNRNTVESSEYARPHPFVLNL
YTVESSEYAHPHPFVLNLYTVESSEYTRPHPFVLNLYTVESSEYACPHPFVLNRNTVESS
EYARPHPFVLNRDTVESSEYACPHPFVLNRDTVESSEYACPHPFVLNLYTVESSEYARPH
PFILNRDTVESSEYTRPHPFVLNRDKVESSEYACPHPFVLNRDTAESSEYACPHPFILNW
DTVESSEYTCLHPFVLNWNIVESSEYTCPYPCFTTVVHLPL
NT seq 1927 nt   +upstreamnt  +downstreamnt
tattaatctgagtttctgcctaaatgtatctggaaagcacctgccagactctattggctt
caatttggagatccagctggacaaactgaagcagaaaggggctgtcaagcgtgcactgtt
cctcgactcccaccaaccatactttcagaagagaatcctgatccagaatggagcgggaga
ggcctgcgatgagatgaaaatctacctcagggaggactctgaattccgagataaactctc
accgatttacatctccatgaactttagtttggatcctcacgcccctgcggacatgcatgg
tctgcagcctctcctgaactaccttaccaagaatgtcattgaacagaaggcattcattca
gctcgactgcggtgaagataacatctgcgtaccagacctccatctcactgtctctgggga
tcggggtgaggtgtacctaggagacgaaaacgcgctcatcctgactttcggtgccgagaa
caagggcgaaggaggagcgtacgaagcggatctgtatgtgatcttacctccagaggcgga
atacagtggggttgtgcggaacaatgagctgctagctggcctgagattcaccgtgccaca
tctccgggacaacaagaaaacggtgcactttgaacttcagattcgcagtaaaaatgagaa
taattcccgaagtgagcttgtggtttacagcctggacgtggcggttctagccaaaatcct
cttccatggtgtctccaatcctgagaacgtcatgttcccattcccaaactggaaacccag
caagaagccagtaactgagcaggacatcggaccctcggtggaacacgtttatgagttggt
caacaatggcccaagttggatcagccactccatcctggaggtgaggtgtcccatccggtt
ccagagcaatgagctgatgtatgtcatccagtacacgcctgaccgactcatggactgtac
ctccactccgcatctggaccccctaaacgtgaaggtgcagaattctccaacagagcaggt
gctggtgttggctcagaaacaagcaaaccacgtccagaaacgagaggctcccagggacaa
cttgtggaacaccgacacactgtcgagtccagcgagtacgcccgcccgcccgcacccctt
tgttttaaatcgggacacagtcaagccaagcgagtacacctgcgcgcaccccttcatttt
aaatcggaacacagtcgagtccagcgagtacgcccgcccgcaccccttcgttttaaatct
atacacagtcgagtccagcgagtacgcccacccgcaccccttcgttttaaatctatacac
agtcgagtccagcgagtacacccgcccacaccctttcgttttaaatctatacacagtcga
gtccagcgagtacgcctgcccgcacccctttgttttaaatcggaacacagtcgagtccag
cgagtacgcccgcccgcaccccttcgttttaaatcgggacacagtcgagtccagcgagta
cgcctgcccgcaccccttcgttttaaatcgggacacagtcgagtccagcgagtacgcctg
cccgcaccccttcgttttaaatctatacacagtcgagtccagcgagtacgcccgcccgca
ccccttcattttaaatcgggacacagtcgagtccagcgagtacacccgcccgcacccctt
cgttttaaatcgggacaaagtcgagtccagcgagtacgcctgcccacaccccttcgtttt
aaatcgggacacagccgagtccagcgagtacgcctgcccgcaccccttcattttaaattg
ggacacagtcgagtccagcgagtatacctgcctgcaccccttcgttttaaattggaacat
agtcgagtccagcgagtacacctgcccgtacccctgttttacaacagtagtgcatctgcc
cttgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (45)   

Download RDF
DBGET integrated database retrieval system