KEGG   Latimeria chalumnae (coelacanth): 102364509
Entry
102364509         CDS       T02913                                 
Symbol
RNF168
Name
(RefSeq) ring finger protein 168
  KO
K20779  E3 ubiquitin-protein ligase RNF168 [EC:2.3.2.31]
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcm04121]
    102364509 (RNF168)
   03400 DNA repair and recombination proteins [BR:lcm03400]
    102364509 (RNF168)
Enzymes [BR:lcm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     102364509 (RNF168)
Ubiquitin system [BR:lcm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    102364509 (RNF168)
DNA repair and recombination proteins [BR:lcm03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Ubiquitin ligases
     102364509 (RNF168)
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 Prok-RING_4 zf-RING_UBOX zf-C3HC4_4 zf-RING_5 zf-RING_2
Other DBs
NCBI-GeneID: 102364509
NCBI-ProteinID: XP_006010570
Position
Un
AA seq 597 aa
MAKSSEAHLSLEDCMCPICCELLLEPVTLPCNHTLCNPCFQLTVEKANLCCPLCRQRVST
WARYHARNNTLIDRKLWDRVQKAYPEECQRRAAGQEEVVYTFHPPPKLSEPGELREEYEA
QLNKAEAERQAREEEERKASEEYIQKLLAEEEEERELAELRRKEREEQFRLDEELARSLS
NDMTAVMEIKKDGFSSPARPAVGRQNSVSTSKRSKRTKKTSCTGDIERYLSLTATQHFSQ
RETKDSAVTERSFIVVNGSASTEDIDSTEMPTLTPPQALHLMNEEAPGSSFDRIMPKLSP
YKQGICDALETERVLPQDSGMETREKSHRHSTKPSLSMKNQGDAGNGCIHLSYRRQLPFT
QGCNHKGTEKLKVNGGNLENFDNEQELDCDTIGQSLNESELQESHNRKNVESCDKEEPWG
VGKRKRGAGDMGEADRGSTHMLHLMEQEKQLYEKHKQEEEDWQLALKIQKKMDQELKNVN
RKKGSPDEYLLRPKCISVVGQENVPVGEEEPPRSQRIREHKSFGRWGQTSPARDSSLTPT
NGHRERNVQKSQAPAKPARTGGKGSSNSLRVLELVRAVQTGNKQQTTIEMLQKCDRK
NT seq 1794 nt   +upstreamnt  +downstreamnt
atggcgaagtcatctgaggcccacctgtccctggaggattgcatgtgcccaatttgctgc
gaactgctgctggaaccggtgaccttgccctgcaaccacaccttgtgtaacccatgtttc
cagctgactgtggagaaggccaacttgtgctgcccgctgtgccggcagcgggtatccacc
tgggcacggtaccatgcccgcaacaacaccctcatcgacaggaagctgtgggaccgagtg
cagaaggcgtaccctgaagagtgccagcgcagagccgctgggcaagaggaagtggtatac
accttccatccaccacctaagctgagcgaacctggggagctgcgagaggagtatgaggca
caattaaataaggcagaagcagagcggcaggctcgtgaggaggaggagaggaaagcgagt
gaagaatacattcagaagctgctggcagaagaggaagaggaacgtgagcttgcagagctg
cgaaggaaagagagggaggaacagttccgactcgatgaagagttggcacggtctttaagt
aatgatatgacagcagtaatggagatcaagaaggatggttttagcagcccagctaggcca
gcggtgggtaggcagaactctgtttccacttcaaaaagaagcaaaagaacaaagaaaacc
tcgtgtacaggtgacatagagagatatttgtcattgacagcaactcagcacttctctcag
cgtgaaactaaggactctgcagtgacggaaagaagtttcattgttgtaaatggctctgct
tcgacagaagacattgacagtaccgagatgccaactttgactcccccacaggccctacat
cttatgaatgaagaggctccaggttcttcctttgataggataatgcccaagttatccccc
tataagcagggaatctgtgatgccctggaaacagaaagagtactccctcaggacagtggc
atggaaaccagagagaagtcccacagacactctactaaaccttctctctcaatgaaaaat
caaggggatgctgggaatggctgcatacatctttcatacaggaggcagctgccattcaca
cagggttgtaatcataaaggaacagagaagcttaaagtaaatggtggaaacctggagaac
tttgataatgagcaagagctggactgtgataccattggccaaagtctaaatgaatctgaa
ttgcaggagtctcacaacagaaaaaacgtggagtcttgcgacaaggaggagccatggggt
gtaggtaaaaggaagagaggagcaggggacatgggtgaagcagacagagggagcacccac
atgctgcatctgatggagcaggaaaagcagctgtatgaaaaacacaagcaggaggaagag
gactggcagctggccctgaagattcagaagaagatggaccaagagctaaaaaatgtaaac
cgaaagaaaggctcccccgatgagtacctgcttcgccccaaatgcatctctgtggtgggg
caggaaaatgtaccagttggcgaagaggaaccacccaggagccaaagaataagagagcac
aaaagttttggtaggtggggacagacctcaccagctagagatagcagccttactcctact
aatgggcacagagagagaaatgtgcaaaaatcacaggcaccagctaaaccagcaaggact
ggggggaaaggatccagcaacagcctccgagtgctggagctggtcagggcagtacaaact
ggtaacaagcagcaaacgaccatagagatgcttcagaaatgtgatcgcaagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (43)   

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