KEGG   Latimeria chalumnae (coelacanth): 102364888
Entry
102364888         CDS       T02913                                 
Symbol
GRIN2C
Name
(RefSeq) glutamate ionotropic receptor NMDA type subunit 2C
  KO
K05211  glutamate receptor ionotropic, NMDA 2C
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04020  Calcium signaling pathway
lcm04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    102364888 (GRIN2C)
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    102364888 (GRIN2C)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:lcm04040]
    102364888 (GRIN2C)
Ion channels [BR:lcm04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   102364888 (GRIN2C)
SSDB
Motif
Pfam: Lig_chan Lig_chan-Glu_bd SBP_bac_3 ANF_receptor NMDAR2_C
Other DBs
NCBI-GeneID: 102364888
NCBI-ProteinID: XP_005998336
Ensembl: ENSLACG00000011764
Position
Un
AA seq 1404 aa
MDLTLYWMFMCCLRLTCMMISVFAWVSGGPILNVAIVFGGSNYQMEMKSKLTRDSFHGLP
LEINPVLVIINNTNPSALLTQICDVLSNSRIHGVIFEDNIGTEAVAQILDFISSQTSVPI
ISISGGSAVVLIPKEQGSTFLQLGASMEQQISVIFKVLEEYDWSSFAVITSLYPGYDDFI
DYIKIFTDTSYFGWELENILTFEMTQEWSNSKTQRLLKQIDSQVIIVYCSHEEAEYLFEV
AAESGLIGPGNIWIVPSLTVGNMERPPQRFPIGLISVMTDRWKVNLRQRIRDGVAVIAKG
AASFLKQNKLLPNLTINCQAPANPTMINAFYRHILNVTWERKDFSFNENGYLVRPSMVVI
TLTRDKLWDTVGKWENGLIQMKYPVWPRYGSFLQPMSDNRHLTVATLEERPFVIVENVDP
VTGGCVRNTVPCRKQTNRTGSGVNVADPYVKLCCKGFCIDILKKLAKTVKFSYDLYLVTN
GKHGKKVRGVWNGMIGEVYYKRADVAIGSLTINEERSEIIDFSVPFVETGISVMVARSNG
TVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFIFEFFSPVGYNKTLTNGKKPGGPTFTIG
KSIWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQYIDTV
SGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIKNNYKDMHTHMVKYNQRSVEDALTSLKT
GKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKESKWKRPVDLALLQF
LGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLTFAWEHLLF
WKLRHTIKKSDKLDFLLAISRGIYSCFNGVQDIDSPIHVHTPDVTANYAQANMLKMLQTA
KDIVSSTNVEDSLENATRTIENWTRRSENVQGSFPLRSPKLVINNSNVCSSKQPYLSDLK
DNSITYIPRPVTSIHTPTTYRYGDMKPQMLEKQRTVRHHLPFKSPMYMGGSYVDDQNLPI
STITNSPQLVDRNPDFLNPHQTGHIYVRNPHREPNSIFVPYRDLQLPDLYREYKNPIPSK
LYSPEIVRKGKSHHQYLVETSDMMLGAAAINADRPFSQRNENQYIESHIPTLSCMNNHVT
RASVNCNSCIKAYGEPEPDEMLLLEKEKFNRRASLIRAAWEHNEKLKALGLANPPKSSSF
HRETPNLFPKPRLVLKQSPTLHSTMENDLHYPTHIVKANYAYNNKYEDPIARHPFKQQRL
KHSQSTRLPSYSEACLQNAAALRRSSTVVHRHYSYVDSYAHLPMCLGQLNQVPSHFYEPT
EKMGNRFTYADQYPDDDTFIAKGSDGRLSYENGVYRTYRHVSGMDSEHHQVPSKDKRQYL
AARRMNRSYAAKPWRRVSSLESEV
NT seq 4215 nt   +upstreamnt  +downstreamnt
atggacctcactctgtactggatgttcatgtgctgcctcaggttgacttgtatgatgata
agcgtctttgcttgggtttctggaggtcctatccttaatgttgccatagtgtttgggggt
tccaattaccaaatggaaatgaaaagtaaactgactagggatagttttcatggcttgcca
ctggaaattaacccggtcttagtaattatcaacaacaccaacccaagtgcacttttaaca
cagatctgtgatgtgctttccaactcccggattcatggagtcatctttgaggataatatt
gggacagaagctgttgctcagattttggattttatttcttctcagacttcagttcccatc
attagtatcagtggaggatctgctgtagttctgatacccaaggagcaagggtctaccttc
ctacaacttggtgcttccatggagcaacaaattagtgttatatttaaagtcttagaggag
tatgactggagttcttttgcagtaattaccagtctctaccctggttatgacgactttatt
gattatattaaaatctttactgataccagttactttggttgggaactcgagaacattctt
acctttgagatgacacaagagtggagcaactcaaagacacagcgtctccttaaacagata
gattcccaagtcatcattgtatattgttcacatgaagaagcagagtacctgtttgaagta
gctgcagaatctggcttgattggccccggcaatatatggattgtgcctagcctaactgtt
ggaaatatggaacgtccaccacaaaggttccccattggactgatcagtgtcatgactgac
cgatggaaagtgaatttgagacaaaggattagggatggcgtcgctgtcattgcaaaaggg
gctgcaagctttttaaaacaaaataaacttctccctaatctcactattaactgccaagct
ccagcaaatcctacaatgatcaatgcattttacagacatatcctaaacgtgacctgggaa
cgcaaagacttctcctttaatgagaatggttacttggtgaggccctccatggtagttatt
acattgacccgggacaaactctgggatacggtaggaaaatgggagaatggactcattcag
atgaaatacccagtttggccaagatatggatcatttctacagcccatgtcagataatcgc
cacttgacagttgctactctagaggagcgtccctttgtgattgtggaaaatgtggatcca
gttactggaggttgtgttagaaacactgttccctgccgaaagcaaactaacagaactggc
agtggggtcaatgttgctgatccttacgtcaagctgtgctgtaaaggattctgtattgac
attctgaagaagttagccaaaactgtgaaattctcttatgacttgtacctggtgacaaat
gggaaacatgggaaaaaagtgcgtggagtctggaatgggatgattggagaggtatactac
aaacgagctgacgtggccattggttccctcaccattaatgaagaacgctctgagataata
gacttttctgtgccatttgttgaaacgggaatcagcgtgatggttgccagaagtaatggc
acagtatcgccttcagcttttcttgagccttacagccctgcggtgtgggtcatgatgttc
gtgatgtgtctcacagtggtagcaattactgtcttcatatttgagttctttagccccgtt
gggtataacaagactctcaccaatggaaaaaaacctgggggtcctaccttcaccattggc
aaatcgatttggcttctttgggctctggttttcaataactctgtcccaatagagaatccc
aaaggaaccaccagtaagattatggtgctgatctgggctttctttgctgtcatatttttg
gcaagttacacagctaatctggcagcttttatgatccaggagcagtatatagacactgtc
tcaggccttagtgataaaaagttccagaagccacaggaacaataccccccatttcggttt
ggcacagtccccaatggcagcactgaacgcaacatcaaaaataattacaaagatatgcac
acacacatggtaaaatataaccaacgatctgtggaggatgcactaaccagcctaaaaaca
gggaaattggatgcatttatttatgatgctgctgtactgaactacatggctgggaaggat
gaaggctgtaaactggtgactattggaagtgggaaagtgtttgccactacagggtatgga
attgcattacagaaagaatccaagtggaagcgacctgtagacttggctttgctgcagttc
ctaggggatggagagacacagaaactggaaacagtatggctttcaggaatctgtcagaat
gaaaagaatgaggtgatgagcagtaagttagacattgataacatggctggtgttttctac
atgctgctagtggccatgggccttagtctgcttacctttgcatgggagcaccttctcttc
tggaagctgagacacaccatcaaaaaatctgacaagcttgactttctacttgccatcagc
aggggtatttacagttgcttcaatggagtgcaagatattgatagccctattcatgttcac
acaccagatgtcactgccaactatgctcaagccaatatgttgaaaatgcttcagaccgca
aaagacattgtttcttccaccaatgtagaggactctttggagaatgctacacggaccatt
gaaaactggactcgacgaagtgaaaatgtacaaggcagtttccccttaaggtcacccaaa
ttggtgataaacaattctaatgtatgttcaagcaagcagccttacctatctgatcttaaa
gataacagtattacttatataccaaggcctgtaacttcaatacatactccaacaacatat
aggtatggggatatgaaaccacagatgcttgagaaacagagaacagtgagacaccacctc
ccattcaaaagccctatgtacatgggaggaagctatgttgatgatcaaaatcttcctatt
tccaccataacaaacagtccacaactggtagacaggaacccagatttcttgaatccccac
caaaccggacatatctatgtgagaaatccacatagagagcctaattcaatatttgtgcca
tatagagatttacagttaccagatctctacagagaatacaaaaacccaatacctagtaag
ctatattctcctgagatagttagaaagggaaaatctcatcatcagtaccttgttgaaaca
tctgatatgatgcttggagctgcagctatcaatgcagacagacccttttcacaaaggaat
gaaaatcagtacattgaaagccacattcctacgttatcatgtatgaataaccatgttacg
agggccagtgtcaattgtaactcctgcatcaaagcatatggtgagcctgaaccagatgag
atgctacttctagagaaggagaaattcaacagaagagcttctttgatcagggcagcatgg
gaacataatgaaaaactgaaagcactagggttagcaaatcctcctaaaagttcatcattt
catagagaaacccctaacctcttcccaaaaccaaggttagtccttaaacaaagtcctaca
ttacatagcactatggaaaatgatttacattatcccactcatatagttaaggctaactat
gcatacaataacaaatatgaggaccccattgcaagacatcctttcaagcagcagaggctg
aaacattcacagtctacaaggttgccttcctacagcgaggcatgtttgcagaatgcagca
gctttgcggcgttcttccactgttgttcacagacactattcctatgtagattcgtatgct
cacctgccaatgtgtttgggccagctgaatcaagttccttcccacttttatgaacccact
gagaagatgggtaatcgatttacttatgctgatcaatatcctgatgatgacaccttcata
gcgaagggtagtgatggaaggctaagttatgaaaatggtgtctacagaacatatagacat
gtaagtggaatggattcagaacatcatcaagtgccaagcaaagacaagaggcagtattta
gctgctaggagaatgaataggtcttatgcagccaaaccatggagaagagtttcaagctta
gagtcagaagtctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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