KEGG   Latimeria chalumnae (coelacanth): 102365285
Entry
102365285         CDS       T02913                                 
Symbol
ITGA1
Name
(RefSeq) integrin subunit alpha 1
  KO
K06480  integrin alpha 1
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04510  Focal adhesion
lcm04512  ECM-receptor interaction
lcm04810  Regulation of actin cytoskeleton
lcm04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102365285 (ITGA1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102365285 (ITGA1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102365285 (ITGA1)
   04810 Regulation of actin cytoskeleton
    102365285 (ITGA1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcm04147]
    102365285 (ITGA1)
   04515 Cell adhesion molecules [BR:lcm04515]
    102365285 (ITGA1)
   04090 CD molecules [BR:lcm04090]
    102365285 (ITGA1)
Exosome [BR:lcm04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102365285 (ITGA1)
Cell adhesion molecules [BR:lcm04515]
 Integrins
  Integrin alpha subunits
   102365285 (ITGA1)
CD molecules [BR:lcm04090]
 Proteins
  102365285 (ITGA1)
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 VWA_2 FG-GAP_3 LYRIC Integrin_alpha
Other DBs
NCBI-GeneID: 102365285
NCBI-ProteinID: XP_014352587
Ensembl: ENSLACG00000001834
Position
Un
AA seq 1255 aa
MDNSFHNINLPQITDEQKKYLNIPITTIQIQSTIKGMASGRIKTSEEKELELKLHNLYEE
AHLVFLLYKIMLEKNYAFLYLSVSGLLQLTTSFNVDEKNAVMINGPVEDMFGYTVQQYEN
EEGKWLLVGSPLVGQPKNRTGDVYKCPVGKSNQPVCVKLNLPDYTSIPNVTEVKENMTLG
TTLVTNPNGGFLACGPLYAYRCGSLHYTTGICSNVSSTFQVVNSIAPAAQECRNVLDVVL
VLDGSNSIYPWEKVNEFLLKLLKNIDVGPDKMQVGILQYGENVTNEFSLNKYSTTKEVQK
AAKNIRQRGGMQTMTALGIHTASAVAFKEENGARKGVKKIMVVVTDGESHDNHNLKQVID
NCENEGIERFSIAVLGSYNRGNQSTEKFVEEIKSIASEPVNKHFFNVSDEVALVSIAEAL
GERIFALEATSEKQAVSFELEMSQAGFSAHYSKDRVMLGAVGAYDWNGTVIMQNDNEFIA
PPNETFKNAPTENIEGLAAYLGYAVNSASVPGEVLYIAGEPRYNHTGQVIIYTMKGEKIK
VLQSLKGEQIGSYFGSVITTVDINNDSVTDILLVGAPMYMGSEREEQGKVYIYSLKEKKF
EYDMSLEPINQPCCSTLKDSSCREETKNEPCGSRFGTAIAAVKDLNLDGFNDVVIGAPFE
DNHRGAVYFYHGAGSTIQKQFAKRIPSGGDGKKLKFFGQSIHGELDLNGDGLVDVTIGGL
GGAAVFWSRDIAQVKADMHFNPNTINIEKKNCLSSGKNTVCVNITICFQVNIKPSKDEPF
AVGLLYDVTIDFHRIHSRGLFFETNEKKLQRNVTINRKLDVEHSFYMLDKHDFQDSVSIL
VEFSLIDSEKGPVLDDQLPASINDTIPFAMDCKSKKCITDLELLTQNEIKLDSHSHFIIK
PTSSKFNVTVTIKNKKDSAYNTRVTAEYSKNLIYSGVHAIQKDLCTVNHTIICKVGYPFL
KHDEEISFKIAFQFNTSYLMDNVIIQLNATSDSEEPDETLHDNFKTISTLVQYEAGLSFS
SSIREYHATIAANDTIPKVIDSLEVVGDEVNITYVIKREGNGPVPQLAMNFSFPNVSSRN
STLLYLTAVSVSENVDCRTNDLIDPLKINSGKTHEPPSNTETFKDTILECKQYPCASFVC
SVKPSDMTEINVSLRVWKPTFIKANMHSLNLIVHAALHSENSSVVLSSENVNRKVMIKVS
KEISPGRVPLWIIILSILAGLLLLALLIFVLWKVGFFKRPMKKQNMEEENTEEEI
NT seq 3768 nt   +upstreamnt  +downstreamnt
atggataactctttccataatattaatctaccacaaatcacagatgagcaaaagaaatac
ttgaatattcccataaccactatacagatccagtcaaccattaaaggtatggcttcaggg
agaattaagacatctgaagaaaaagaactagaacttaagcttcacaacctatatgaagaa
gctcatctggtctttctgttgtacaaaattatgctggaaaaaaactatgcttttctttat
ctctctgtgtcaggcctattgcagctaactacttctttcaatgttgatgaaaaaaatgca
gtgatgattaatggcccagtagaggatatgtttggctacactgttcaacaatatgaaaat
gaggaaggaaaatggctgcttgttggctctcccttagttggtcaacccaagaacagaaca
ggggatgtttataagtgtcctgtaggaaaatctaaccagccagtatgcgtgaagttaaat
ttacctgattatacatctattcctaatgtcactgaagtgaaagaaaacatgacacttgga
acaacactggtgactaacccaaatggagggtttctggcgtgtggaccactctacgcttac
aggtgtgggagtctgcattatacaactggtatctgttcaaatgtcagctccactttccaa
gttgtaaactccattgcgccggctgcacaagaatgcaggaatgtgttggatgttgttctg
gttcttgatggctccaacagcatttatccatgggaaaaagtcaatgagtttttgttgaaa
ttattgaagaatattgatgttggtcctgacaaaatgcaggttggaattttgcagtatgga
gaaaatgtaaccaatgaatttagtctgaataaatacagtacaacaaaggaggttcaaaaa
gcagctaagaatatccgtcagagaggtggaatgcagacaatgactgcacttggaatccat
acagcaagcgctgtggcatttaaagaagaaaatggtgcaagaaaaggagttaaaaaaata
atggtggttgtaacagatggggaatctcatgacaaccacaatttgaaacaggtcattgat
aattgtgaaaatgaaggaattgaaagattttctattgcagtgcttggcagttataataga
ggaaatcaaagcacagaaaagtttgttgaagaaataaagtcaattgcaagcgagcctgtc
aacaaacatttttttaatgtctctgatgaagtagcacttgttagtatagctgaagctctt
ggggaaagaatttttgctctagaagctacatctgaaaaacaagctgtctcttttgaattg
gaaatgtctcaagctggattcagtgctcattactccaaggatcgggtcatgcttggagca
gtaggagcttatgactggaatgggacagttatcatgcagaatgataatgaatttattgct
cctcccaatgagacatttaagaatgcccctacagaaaacattgaaggtcttgctgcatac
ttggggtatgctgtaaactctgcatcagtgcctggagaagtgttatatattgctggagaa
ccccgctataatcatactggtcaagttattatatacacaatgaaaggagaaaaaattaaa
gtattacagtcactaaaaggagaacagattggatcatactttggaagtgttataacaaca
gttgacatcaataatgattctgtaacagatattcttttagtaggagctcctatgtatatg
ggaagtgaaagagaagagcaaggcaaagtttacatatactccctaaaggagaaaaaattt
gagtatgatatgagtcttgaaccaatcaatcaaccgtgctgttcaacattaaaggacagc
tcctgcagagaggagaccaagaatgaaccatgtgggtctcgttttgggacagctattgct
gcagttaaagatctcaatcttgatggattcaatgatgttgtgattggagcaccatttgag
gataatcaccgtggagctgtttatttttaccatggagctggaagtaccatacagaaacag
tttgcaaagagaattccatcaggtggtgatgggaagaagttgaaattttttggccagtct
atccatggggaacttgacttaaatggtgatggtctagttgatgtaacaattggaggcttg
ggtggtgctgctgtattctggtctcgtgatatagctcaagtaaaggctgacatgcatttc
aatcccaatacgattaacattgaaaagaaaaactgtttgtcttctgggaagaatacagtt
tgtgttaatattaccatatgttttcaagtcaatatcaaacccagtaaagatgaacctttt
gcagttggtcttctatacgatgtaactattgatttccacagaattcattccagaggtttg
ttctttgaaacaaatgagaaaaaattacagagaaatgtcaccattaacagaaaactcgat
gtggaacacagcttctacatgttggacaaacatgattttcaagattctgtgagcattttg
gtggagtttagtctgattgactcagaaaagggacctgttcttgacgatcaactgccagct
tcaataaatgacactataccttttgcaatggactgtaaaagcaaaaagtgcatcacagac
ctagaactgcttacacagaatgaaataaaattggacagtcactcccatttcatcatcaaa
cctaccagtagcaagtttaatgtaacagtgactatcaagaacaagaaggacagtgcttac
aatactagagtcactgctgaatattccaaaaatctaatttactctggggttcatgctatt
cagaaagatctctgtacagtcaaccatacaattatatgcaaagtaggatatcctttctta
aaacatgacgaagagatttcctttaaaatagcgttccagtttaacacctcttatctcatg
gataatgttattattcaattgaatgcaacaagcgatagtgaagaacctgatgaaaccctc
catgataatttcaaaaccatctctactcttgttcaatatgaagcaggattaagcttttca
agctccatacgagagtaccatgctacaattgcagcaaatgataccattcctaaagtcata
gattctcttgaggtagttggagatgaagtcaatattacctatgtgattaaaagagaagga
aatggcccagtgccacaacttgcaatgaacttttccttcccaaatgtatcttcaagaaac
agtactcttctttacctgactgctgtatctgtttctgagaatgttgactgtagaaccaat
gacctgattgatccccttaagataaactctggcaaaacccacgaaccaccttcaaacaca
gagacttttaaagacacaattttggaatgcaagcagtacccatgtgcatcttttgtgtgt
tctgtgaagccttctgacatgacagaaattaatgtgtcactaagagtctggaaacctaca
ttcataaaagcaaatatgcatagtttaaatctgattgtacatgcagcacttcatagtgaa
aattcatctgttgtacttagcagtgagaatgtaaacagaaaggtaatgattaaagtttca
aaggaaatttcccctggcagagtgcccctttggattattatactgagtattcttgctggc
cttcttcttctagctttgctgatctttgttttatggaaggttggatttttcaaacggcca
atgaaaaaacagaatatggaagaagaaaatacagaagaggaaatataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (54)   

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