KEGG   Latimeria chalumnae (coelacanth): 102366700
Entry
102366700         CDS       T02913                                 
Symbol
HCN1
Name
(RefSeq) hyperpolarization activated cyclic nucleotide gated potassium channel 1
  KO
K04954  hyperpolarization activated cyclic nucleotide-gated potassium channel 1
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:lcm04040]
    102366700 (HCN1)
Ion channels [BR:lcm04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (HCN)
   102366700 (HCN1)
SSDB
Motif
Pfam: Ion_trans Ion_trans_N cNMP_binding Ion_trans_2
Other DBs
NCBI-GeneID: 102366700
NCBI-ProteinID: XP_005996986
Position
Un
AA seq 844 aa
MESKHNSSPTNRDEKLDGSSMFQGKDQDKKSKMGSQNLKDHVNSVGFKLDRDETMVGFED
AEGQAHQFTFMQRQFELMLQPGVNKFSLRMFGSQKAVEKEQERVKTAGYWIIHPYSDFRF
YWDLIMLIMMVGNLIIIPVGITFFTEQTTTPWIIFNVASDTVFLLDLIMNFRTGIVIEDS
SEIILDPKFIKMNYLKSWFVVDFVSSIPVDYIFLIVEKGFDSEVYKTARALRIVRFTKIL
SLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPLLQ
DFPPDCWVSLNGMVNDSWGKQYSYALFKAMSHMLCIGYGARAPVTMADLWITMLSMIVGA
TCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPSDMRQKIHDYYEHRYQGKI
FDEDNILSELNDPLREEIVNFNCRKLVATMPLFANADPNFVTAMLSKLRFEVYQPGDYII
REGTVGKKMYFIQHGVATVITKSSKEMKLTDGSYFGEICLLTKGRRTASVKADTYCRLYS
LSVDHFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLQRFQKDLNSGVFNNQENEILN
EIVKQDREMVQMAGTSNFQPSLNYITSSTSAQSARIVTQSPPVYTVPSMSHGNLHSPTPS
PQTPQQAVIFSPCSYTTAVCSPPVQSPLASRTFQYGSPNASQLSLMQQQQHHQQQQQAAS
SPSQRNEVNKSTQALHNSNLSREVRPLSASQPSLPHEVSTLIPRPHPSVGESLASMPQPI
SVVQGPVSQSGIRGTVPQRVALFRQMSSGALPPVRGPPPIQHRDSSTVLSTDLESDKPRY
ASNL
NT seq 2535 nt   +upstreamnt  +downstreamnt
atggaaagcaagcacaactcctcgcccaccaacagggacgagaaactggatgggagtagc
atgtttcaagggaaggaccaagacaaaaagagcaaaatgggaagccagaatttaaaagat
catgtaaactcagtaggttttaaactcgatcgggatgaaaccatggttgggtttgaagat
gccgagggacaggcacaccagttcaccttcatgcagaggcagttcgagctcatgctgcag
cctggggtcaacaaattttcccttcgtatgttcggtagtcagaaggcagtagagaaggaa
caagaaagggttaaaactgcagggtactggataatacacccctatagtgacttcaggttt
tactgggacttaataatgctgataatgatggttggaaaccttataatcatacctgttgga
atcaccttctttacagaacaaacaacaacaccatggattatttttaatgttgcttcagat
actgtctttctcttggacctaattatgaatttcaggactggaattgtcattgaagatagc
tcagagataatactggatcccaagtttatcaaaatgaattatttaaaaagttggtttgta
gttgattttgtctcatccataccggtggattatatctttctcattgtagaaaaagggttt
gattcagaggtatacaaaactgccagagcacttcgcattgtgaggttcacaaaaattctc
agtttattacgtttattaagactgtcaagattaattagatacatacaccagtgggaagag
attttccatatgacgtatgatctagccagtgcagttgtgagaatattcaatcttattgga
atgatgcttctgctttgtcactgggatggctgccttcagtttctggtaccattacttcag
gatttcccaccagattgctgggtgtccctaaatggtatggttaatgattcctggggaaag
cagtactcttatgcactcttcaaagccatgagccacatgctctgtataggctatggtgcc
cgtgcccctgtcaccatggctgatctttggataacaatgttgagcatgattgtgggggcc
acctgctatgccatgtttgtaggtcatgctacagctctcatccaatctttagattcctca
cgacggcagtatcaagaaaagtacaaacaagtggaacagtatatgtctttccacaagcta
ccttctgacatgcgccagaagattcatgactactatgaacaccgctatcagggcaagatc
tttgatgaagataacattcttagtgagttaaatgatccacttagagaggaaattgtcaac
ttcaactgtcggaaacttgtagccacaatgcccttatttgcgaatgcagatccaaacttt
gtgacagccatgcttagtaagctacgctttgaagtgtaccaacctggagattacatcatt
cgggaaggtactgttggaaagaagatgtattttattcagcatggagtagcaactgtcatt
actaagtctagcaaggagatgaaactaacagatggatcctactttggagaaatttgcctc
ctaacaaagggccggcgtactgctagtgtcaaggctgacacttattgtcgattgtattcg
ctctcagtggatcactttaatgaagtgcttgaagaatacccaatgatgaggagagccttt
gaaactgtggccattgacaggctggacaggataggaaagaaaaactcaatccttctgcag
agattccaaaaagatttaaactctggagttttcaataatcaagaaaatgagatcctcaat
gagattgtaaaacaagacagggaaatggtacagatggctggtacatccaattttcaaccc
tcattaaattatatcacttcatcaacttctgcccaatcagcaagaatcgtgacacagtct
ccaccagtttacactgttcctagtatgtctcatggaaacctacactctccaacacctagc
cctcaaacaccacaacaggctgtgattttctcaccctgttcctataccactgcagtctgc
agtccaccagttcaaagtccattggcaagccgaactttccagtatggttctccaaatgca
tcacaactatctctgatgcagcaacaacagcaccaccaacagcagcaacaggcagcatct
agtccatcacagagaaatgaagttaataaaagcacacaagctcttcataatagtaacctg
agtagagaggtaaggcctctttctgcatctcaaccttcgttgccccatgaggtttctaca
ttaattccaagaccccatccttctgtgggagagtctttggcatctatgccacaacctatt
tcagttgttcaaggcccagtgtctcagagtggaatccgtggcactgttccacaaagagta
gctctctttcgacagatgtcttcaggagctctacctccagttcgagggcctccacctatt
caacacagagattcctccacagtcttaagtacagatctagagtcagacaaaccacggtat
gcttctaacttatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (37)   

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