KEGG   Latimeria chalumnae (coelacanth): 102367335
Entry
102367335         CDS       T02913                                 
Symbol
CNTN1
Name
(RefSeq) contactin 1
  KO
K06759  contactin 1
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    102367335 (CNTN1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lcm04515]
    102367335 (CNTN1)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:lcm00537]
    102367335 (CNTN1)
Cell adhesion molecules [BR:lcm04515]
 Immunoglobulin superfamily
  Contactins
   102367335 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:lcm00537]
 Others
  102367335 (CNTN1)
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 fn3 V-set Ig_5 Pur_ac_phosph_N Ig_4 C2-set_2
Other DBs
NCBI-GeneID: 102367335
NCBI-ProteinID: XP_006001454
Ensembl: ENSLACG00000003625
UniProt: H3A353
Position
Un
AA seq 1009 aa
MYLLITQLFMLAFIFCLAEEGRRYGPVFEEQPIDTIYPEESPEGRVSMNCRARGNPSVVY
KWKLNSWDINLDNDHYSMVGGNLMITNPEKHKDAGKYICIATNEYGTIVSKEATLSFGYL
DPFSTDERFAVEIKEGIGAVLLCEAPYHYPDDLTYRWLYNEFPTFIHPDRRRFVSQTTGN
LYIAKVESTDIGNYSCFVSSPSVTKSVFSKSISFIPQPEGSVKRYPADIKVRFKDTYATV
GQNVTLECFALGNPVPEISWQKVSEQLPSSAEVSTSGAILNIFNIQPEDEGTYECKAENS
KGRDTHRSRVYVQAYPEWIKQINDTQRDIGSTLTWPCEAKGNPVPSIRWQKNGQAFRRGE
LKINSLSLEDAGMYQCIAENSLGSIYANAELKVLALAPTFESSPVKKKLLAAKGGRLIVH
CKPKAAPKPRFFWSKGTEMLTNSSRMSVWRDGTLEILNVTKMDEGSYTCVAENKRGKANS
TGTLSITDATKITLAPSNADVTVGENATMQCHASHDSTLDLTFIWSVNGYVINYDKEKDH
YERNLMSEAGSELIIKDVHLRHAGRYTCTAQTIVDNATASADLVVRGPPGPPGGVRVEDI
KDTSVTLTWSRGTDNHSPISKYIIQAKNILSEDWKDVKTDPSNIEGNMETAKVTDLIPWM
DYEFRVIATNTLGTGDPSLPSRSIKTLEAAPTVAPSDIGGGGGSNRELTITWTPLSREYF
NGNDFGYVVAFKPYGEKEWKKVTVPGSDVDRYVHKDDTMPPSTQFLVKVKAYNNKGEGPF
SLTAVIFSAQDAPNEAPRRVWTETLSSSEVRVFWEPVYQQSLEGYWVRYWRVQDKEAAAQ
RVMVGNHENSTKLENMLPNSHYHIEVRAHNSAGYGPASTLIDVTTEKAPPSRAPKSLSAS
RSGSEYTITWEHVEPLANESDVKGYKVLYRPEGQPTGKLYKTGEHHIVVPVPQTGEYVVE
VRAHSAGGDGAVSEIRIKGASAGTVSVQGFASFISLLLPILSAIGSLKL
NT seq 3030 nt   +upstreamnt  +downstreamnt
atgtatctcttgattactcagcttttcatgcttgctttcattttttgtttggcagaggaa
ggaagaagatatggaccagtatttgaagaacagcccattgatacaatataccctgaagaa
tctcccgaaggaagagtttcaatgaattgcagggcccgtggaaacccatcagttgtttac
aagtggaagttaaatagctgggacatcaacctggacaatgatcactacagtatggttggt
ggaaaccttatgatcactaatccagagaagcacaaagatgctggaaaatacatctgcata
gcaacgaatgaatatggaactattgttagcaaagaagccactctcagctttggatatctt
gatccattttcaacagatgagcgctttgcagtggaaataaaggaaggcattggagcagtg
cttttatgtgaagctccttatcattacccagatgaccttacatatcggtggctttacaat
gagtttccaacatttatccacccggacagacggagatttgtttctcaaaccactggcaat
ctgtacattgctaaagtggagtcaacagacataggcaattattcctgctttgtgtcaagt
ccttcagttacaaagagtgtcttcagcaaatccatttcttttattcctcagccagaaggt
tctgtgaaaaggtatccagctgatataaaggttcgctttaaagatacctatgcaacagtg
ggacaaaatgtaacacttgagtgttttgcccttggcaaccctgttccagaaatcagttgg
cagaaagtttctgagcagttgccaagcagtgctgaagtaagcacgtctggcgcaattctt
aacatttttaatattcagcctgaagatgaaggaacatatgagtgtaaagctgaaaactca
aaggggagagacacacatcggagtagagtttatgtccaagcttatcctgagtggataaag
cagatcaatgatacgcagagagatattggaagcactctaacttggccttgtgaagcgaaa
ggaaaccctgtcccttccatcagatggcagaaaaatggacaggcttttcgtcgaggtgaa
ctgaaaattaattcattgtctttggaggatgctgggatgtatcagtgcatagcggaaaat
tccctgggatctatttatgcaaatgctgagctgaaagttctggctttagccccaaccttt
gaatcgagtcctgtgaaaaagaagctgttggctgctaaaggaggaagattgattgttcat
tgcaaacctaaagctgcaccaaaaccaagattcttctggagtaaaggaaccgaaatgctt
acaaacagcagcaggatgtctgtctggagagacggcactctggaaattctaaatgtcaca
aaaatggatgagggaagttatacctgtgtggcagagaataaaagaggaaaagcaaacagc
actgggacactttctatcacagatgccacaaagattacccttgctccatcaaatgctgat
gtcacagtgggagaaaatgcaactatgcagtgccatgcatcgcatgattccacgctggac
cttacttttatctggtctgtgaatggatatgtaattaattatgacaaagagaaggaccac
tatgagcgtaatctaatgagtgaagctggtagtgaactgattattaaagatgtacacctg
agacatgctgggaggtatacatgcactgcacagactattgtagataatgctacagcttca
gcagaccttgttgtcagagggcctccaggccctcctggtggtgtacgagtagaagatatt
aaagatacatctgttactttgacttggagtcgtggtactgacaaccatagccccatatcc
aaatacattatccaggcgaagaacatcttgtctgaggattggaaagatgtgaaaacagat
cctagcaatattgagggaaacatggagacagctaaggtcactgatttaataccatggatg
gattatgaatttcgtgtcatagcaacaaataccttagggacaggagatccaagtctccca
tctcgcagcattaagaccctggaagctgctcctactgtggctccatcagatattggagga
ggaggtggaagcaaccgggaactaacaataacatggacgcctttgtcaagagagtatttc
aatggcaatgactttggctatgtagttgctttcaagccatatggagaaaaggaatggaaa
aaagtgactgtgcccggctctgatgttgatagatatgtacacaaagatgatactatgcct
ccttctacgcaatttctagtgaaagttaaggcctacaacaacaagggagagggaccattt
agcctcactgcagtcatcttttcagcacaagatgcgccaaatgaagctccgagaagggta
tggacagagaccttgtcatcttctgaagttcgggtattctgggagcctgtttaccagcag
tcacttgaaggatattgggtacggtattggagggtgcaagacaaagaagctgccgcacaa
agggtgatggtgggcaatcatgaaaattctaccaagctggagaacatgttacctaattca
cattaccacatagaagtaagggctcacaattcagcaggatatggacctgccagtactctt
attgatgttaccacagaaaaagcacctcccagccgtgcaccaaagagcctcagtgcatct
agatcaggctcagagtataccatcacatgggaacatgttgaaccactcgctaatgaatct
gatgtgaaaggatacaaggtactctatcggccagaaggtcaacctacagggaagttgtat
aaaactggtgaacatcatatagtagttccagttccacaaactggagaatatgttgttgaa
gttcgagcacacagtgcaggaggagatggagcagtgtctgaaatccgaatcaaaggcgct
tctgcaggaacagtctctgtgcagggctttgccagcttcatctctctgctgttgcctatt
ctgagtgccattggtagcctaaagctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (10)   
   Pfam (10)   
All databases (55)   

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