KEGG   Larimichthys crocea (large yellow croaker): 104918222
Entry
104918222         CDS       T04659                                 
Name
(RefSeq) tripartite motif-containing protein 46 isoform X1
  KO
K12022  tripartite motif-containing protein 46
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lco04121]
    104918222
Ubiquitin system [BR:lco04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    104918222
SSDB
Motif
Pfam: zf-B_box COS zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_4 zf-C3HC4_3 SPRY zf-RING_5 fn3 Spike_torovirin
Other DBs
NCBI-GeneID: 104918222
NCBI-ProteinID: XP_019109500
Position
XIII:16023187..16032726
AA seq 787 aa
MAEAELHTFTSIMDALVRISSNMKSMEQELHCPVCDEMVKQPILLPCQHSVCLLCAAEVL
VQRGYPPPDLPPEPNSPASTPNTRSPRQARRPTPRTPDRLERVLRTVCGTYPGRRRKDTA
LPPMFFPCPSCQEDVELGEKGLTDCLRNLTLERIVERYRHTVSLGSVAIMCGFCKPPQSL
EATKGCADCKSNFCNECFKLYHPWGTPRAQHEHILPTNNFRPKVLTCTEHEQERLQWYCR
NCQRLLCSLCKLRRVHHGHKVLPIAQAYQALKDKVTKEVNFILANQETIQSQITELEAAI
KQMEANSAVALHQLTHCIRELGAAVAERQGALALALEASRSRREEALSAQVSERRGLLEH
AGLMAYTQELLKETDAPCFVQAARVTHNRLVKAIENLQCFTLSAETSFRHFHLDASKEIK
LIHDLEFIRAPLAPVIDTQKTLAYDQLFLCWRLPQDSAQAWHFSVEFQRRAGGAAATWGG
IRSPNAATAWQRLDEVRGTSAVVDRLQMDSVYVLRVRGCNKAGFGEYSEEVYLHTPPAPV
LSFSLDSRWGLHADRLALGRGQTYARSVPGLSLLQAADRTLTSCHLTSDLLVADLAVTQG
RHYWACSVEPGSYLVKVGVGQEAKLQEWFHLPQDMASPRCDPDSGHDSGAEDGQDSPPFC
FLTMGMGKILLPQGHGHSQSQGDSHSQGGLHSHNSSHSNLPHPHTTPLPPRLGVCLDCDK
GRVTFYDAHSLRILWEGHLDCSVPVCPAFCFIGGGALQLQDLVANQSIEEPPPRRVTIQT
RATNLSK
NT seq 2364 nt   +upstreamnt  +downstreamnt
atggcagaagcggagttacacacctttacctctataatggacgcgttggttcgcattagt
tccaacatgaagagcatggaacaggagctgcattgtccggtgtgtgatgaaatggtaaag
cagcccatcctgctgccatgccagcacagtgtgtgtctgctgtgtgcggccgaggtgttg
gtacagaggggttatcctcctccggacctccctccagagcccaactcaccggcctccaca
cccaacactcgctctccacgtcaggcacgaagacccacgcccaggacgcctgaccgcctg
gagcgggtcctgagaacagtgtgtgggacatacccaggacggaggcggaaggacacagcc
cttccccccatgtttttcccatgtccttcctgccaggaggacgtggagctcggagagaaa
ggcctgacagactgcctccgtaacctcacactggagcggattgtggagaggtacaggcac
acagtaagtctgggcagcgtagccatcatgtgtggtttctgtaagcctcctcagtcactg
gaggccaccaaaggttgcgctgactgcaagtccaacttttgcaacgagtgtttcaaactc
taccacccttggggaaccccccgagctcagcatgaacacatactacccaccaacaacttt
cggccaaaggtcctaacatgtacagagcatgagcaggagagactgcagtggtactgccgt
aactgccagaggttactgtgctcactttgtaagctccgtcgtgtccaccatggacacaaa
gtgttgcctattgcacaggcttaccaggccctcaaggacaaggtcaccaaggaagtcaac
ttcatcctggccaaccaggagacaatacagagtcagatcactgaactggaagctgccatc
aaacagatggaggcgaacagcgcagtagctctgcatcagctgactcactgcatccgagag
ctgggagcggctgtagcagagcgtcagggggctctggctttggccctggaggcatctcgc
agcaggagagaggaggccttgtctgcccaggtctcagagaggcgaggcctgctggagcac
gcaggcttgatggcctatacacaagagctgctcaaggagacggatgcaccctgcttcgta
caggctgccagagtcactcacaataggctggtgaaggccatagaaaacctacagtgcttc
actctctctgctgaaacctctttcagacacttccacctagatgcatctaaagagatcaaa
cttatccacgacttagagttcatacgtgccccactggctcctgtcatcgacactcagaag
acacttgcttacgaccagctgtttttatgctggcgcctccctcaggactcggcccaagct
tggcacttctctgttgaattccagagacgggcaggaggagctgcagccacgtggggcggc
atcaggtcccctaatgctgcaacagcatggcagcgtctggatgaagtgagagggaccagt
gctgtggttgaccgactgcagatggacagtgtgtatgtgctcagggtgagaggctgcaac
aaggctgggtttggagagtacagtgaagaggtttacctccacactcctccagcacctgtg
ttgagtttctccttggactcacgctgggggttgcatgctgacaggctggcattgggtaga
ggccaaacgtacgcccgcagtgtgccaggcctctcccttctgcaggccgctgaccgcaca
ctcacttcttgccacttgacttctgacctgttggtggccgacttagcagtcactcaaggc
agacactactgggcatgctctgtggagcctggatcctacctggtaaaggttggagtaggg
caggaggccaaactacaagagtggtttcatctcccccaggacatggccagccctcggtgt
gacccagacagtggccatgacagtggtgccgaggacggccaggactctccacccttctgc
ttcctcacaatgggcatgggcaagatcctgcttcctcaaggacatggtcacagtcagagc
cagggggacagccacagccagggagggctgcactcccacaatagcagccatagcaacctg
cctcaccctcatactactcccctgccaccccgactaggagtgtgtctggactgtgacaaa
ggacgtgtcacattttatgatgcccacagtttgcggatcctctgggagggacatttggat
tgttcagttccagtgtgtccggccttctgcttcattggtggaggggccctgcagctgcag
gaccttgtggccaatcagagcattgaggagccgccgccacggagggtaactatccaaaca
cgtgcaacaaatctcagcaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (11)   
   Pfam (11)   
All databases (54)   

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