KEGG   Larimichthys crocea (large yellow croaker): 104918354
Entry
104918354         CDS       T04659                                 
Name
(RefSeq) helicase ARIP4 isoform X3
  KO
K10876  RAD54-like protein 2 [EC:5.6.2.-]
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lco03400]
    104918354
DNA repair and recombination proteins [BR:lco03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     104918354
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII AAA_22
Other DBs
NCBI-GeneID: 104918354
NCBI-ProteinID: XP_010728377
Position
XV:complement(417778..478723)
AA seq 1490 aa
MLLLDESESFADQSHSAPFSTENEAQGGDSAAWQCTPPPSTSPSGETPAHPPASQLSRPQ
SRPVSQSPSPPSVLTGAKKRGSKPTHMRRNIRKLLRDHQLEAVTKAAQQDELERRRRLEH
QRQQEFPVPLLPEYTTGDVTKHVSVSSASAASQQEVKSVRQEVICLDSSSTGISEDDSKT
NIPTSITTEHTRKTDVIELSSGEDDAVVQVSNESTSVEEREPSGSHANDALNQPDTHGRV
LVNLNHPTTENDVFLSPQLARAVKPHQIGGIRFLYDNLVESVERFNSSTGFGCILAHSMG
LGKTLQVISFIDVLFRHTQAHTVLAIVPVNTLQNWLSEFNMWVPPPEALPPDTDPGLVTP
RTFKVHILNDEHKNTTTRATVVENWARDGGVLLMGYEMYRLLSLKKSFVAGRKKKSKKAA
GPVVIDLDEEDRQQELLKGIEKALARPGPDVVICDEGHRIKNCHASTSQALKNIRTRRRV
VLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCVDSTPQDVQLMRYRS
HVLHSLLEGFVQRRGHDVLKDQLPSKEEHVILVRLSPLQRALYTEFMNRFREAGNTGWLS
LNPLKAFCVCCKIWNHPDVLYEALQKENLASDQDLDLDDITSTGPARCPTAPNQKAKPLE
NHNPIGGLSLNQLQEKANQVVTYEWAKDIMCDYKPGILENSAKMVLLFHLIEESVRKGDK
LLVFSQSLSTLTVIEDFLVKRPVPPSPNTSGRDRPNQNWVRNLNYYRLDGSTTASERERL
INQFNDPSNTSALVFLLSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQRK
PCHIYRLVCDFTLEKKIYDRQISKQGMSDRVVDDLNPVLTFTRREVESLLHFVEEEPDLS
QVQLLPHDSMEGVLMKALHFYPHLITKQPFPHESLLIDRRELKLSSAEKKAARKGYEEEK
RASVPYTRPSYAHYYPASDQSLTNIPAFSQRNWCPPPRTEEKPVASVRPVQSTPVPMMPR
QAQAAGSSPSDDSSGSNLGGFPVNCLQKAGVFVQRIVTTTDIVIPGTNSSTDVQARITAG
ESIHVIRGTKGTYIRTSDGRIFAIRAAKAKTAEESTTVPPKESQAPPKEVSTNGSNGCLS
PDRMQQVPSKTVPRPLSPDSPEIISELQRYTGGTGAGANAGSGVQPEKAAENNLPSTKPV
QTNGSSGSSGSSFASGNVSHHDASVTNVIQPNMDATAAAQDLRTGSKRKTSSPSIDELPV
KQPSAGKHSSAPLASQGFPFTGGYGLPPLGLNPVMLSGSLGHPLLLGAGSPYFQPPHTQL
GDPSYMYPDLYGFGGASPVPTSSSSTTTTATAVSSSSSSSSSSSASVKGTSSVPGALPPF
MLSPSMAGMAGMLSPGFSLSYSQSLASLYTGSMHPGGLPGTAATPGPAGASFLSQYPPTA
ASSSSSSSPSSFSPSARSEGHRGTVLVNGGNVSSASSSDDDDDVIEVRGQ
NT seq 4473 nt   +upstreamnt  +downstreamnt
atgctgctcctggacgaatcagagtcattcgcagaccagtcccacagtgcccccttcagc
actgagaatgaggctcagggaggcgactcagctgcgtggcagtgcacccctcccccatct
acctcaccttcgggagagacaccggcccaccctcctgcctcccagctgtccagaccccaa
tccaggccggttagccaaagcccctcccctccctctgtcctgacaggagccaaaaagagg
ggctccaaaccgacacacatgagacgtaacatcaggaagttgctaagggatcatcagttg
gaggcagtgaccaaagccgcccagcaggatgagttggagaggaggcgacgtttggagcat
cagagacaacaggagttcccggtaccactgctgcctgaatacacaactggtgatgtgaca
aaacatgtgtcggtatcgtcggcatcagcagcatcacagcaagaagtgaagtcagtcaga
caggaagtgatctgcctggactccagcagcactggcatcagcgaggatgacagcaaaact
aacatacccacctccattaccacagagcacacacggaaaacagatgtcatcgaactgagc
tcaggcgaggacgacgccgtcgtccaggtcagtaacgagtccaccagtgtggaagagcgt
gaacccagtggctcgcatgccaatgacgcccttaatcagccagacacccatggaagggtg
ctggtcaacttgaaccatccaaccacagagaatgatgttttcctgtcacctcagctggca
cgagcggtcaaacctcaccagatcggtggaatccgtttcctgtacgacaacctggtggag
tcggtggagaggtttaacagtagcacaggatttggctgtatcctcgctcacagcatgggc
ctgggcaaaacgctgcaggtcatctccttcatcgatgtcctgttcagacacacccaggct
cacacagtgctcgccatcgtacctgtgaacacgttgcagaactggctgtccgagtttaac
atgtgggtcccacccccagaagcgttacctccagataccgatccaggactggtgacacct
cgcacctttaaggttcacatcctcaacgacgaacacaaaaacacgacgaccagagccacg
gtggtggagaactgggcacgggacggaggggtgctgctgatgggctacgagatgtaccgc
ctcctgtcgctaaagaagagctttgtggctgggaggaagaagaagagcaagaaagcagcg
ggacctgttgtcatcgacctggacgaggaggacagacagcaggaactgctcaaaggtatt
gagaaagctttggcccggcctggcccagatgtggtgatttgtgacgaaggccatcgtatc
aagaactgccatgccagcacatcacaggctctgaagaacatccgaacccgacgccgtgtg
gtcctaaccggctatccgctccagaataacctgattgagtactggtgcatggtcgacttt
gtccgacctgacttcttaggtactcggcaggagttcagtaacatgtttgagcgtcccatt
ctgaacgggcagtgtgtggacagcacacctcaggatgtccagctgatgaggtacaggagc
cacgtcctgcacagcctcctggagggcttcgtacagagacgtggtcatgatgtcttgaag
gaccagctgccctctaaagaagagcatgtgatcctggtgcgtctgtctcccctgcaacgg
gcgctctacacagagttcatgaatcgcttcagagaggcaggaaacaccggctggctcagc
ctcaaccctctgaaggctttctgtgtctgctgcaagatctggaaccatccggacgtactg
tacgaggccttacagaaggagaacttggcaagtgaccaagacttggatcttgatgacatc
acttccacaggtccggctcgttgtccaaccgcacctaaccaaaaggcaaagcccctggag
aatcataaccccattggtggactgagcctcaatcagctgcaggagaaagccaatcaggtc
gtcacttatgaatgggcaaaggacatcatgtgtgactataagcccggcatcttggagaac
tctgcaaaaatggtgctgctgttccacctgatagaggagagcgtcagaaagggagacaag
ctccttgtcttcagtcagagtttgtccacactgacagtgatcgaggactttctggttaag
agaccagtacctccgtcgcccaacacgtctggcagagacagacctaaccagaactgggtg
cggaacctcaactactacagactggatggaagcacaacagcctcagagagagagagactg
ataaaccagtttaacgatccgtccaacacctcagcattggtcttcctgctgtcaaccagg
gctggttgtctgggcgtaaacctgattggggcgaaccgcgtggtggtgtttgacgcctca
tggaacccgtgccatgatgcccaggccgtgtgccgcgtctaccgctatggtcagaggaag
ccgtgtcatatctaccggcttgtgtgtgacttcactctggagaagaagatctacgaccga
cagatctccaaacagggcatgtcagaccgggtggtggatgatctgaaccctgtgctgacc
ttcaccaggagggaagtggagtctcttcttcacttcgtggaggaagagccagacctgtcc
caagtccagctgctgccccatgacagcatggagggcgtccttatgaaggccctgcacttc
tatcctcacctgattactaagcaaccattcccccacgagtctctgctgatagaccgcagg
gagctgaagctgagcagcgctgagaagaaagcagcgaggaagggatatgaagaggagaag
agggcttctgtaccatacacacgaccttcttacgctcactattatcctgccagcgaccag
agtctcaccaacatccccgctttcagtcagagaaactggtgtccaccgccacgtaccgaa
gagaagcccgtggccagtgtccggccagtgcagtcaactccagttcctatgatgccccga
caggcgcaggctgcaggctcttccccaagcgacgattcatcaggatccaacctcgggggg
ttccctgtcaactgcctgcaaaaagctggggtgtttgtgcaaaggatcgtcaccactact
gacatagttattccaggaactaacagctcaacagatgtccaggccaggatcactgcagga
gagagcatccacgtcatcaggggcaccaaagggacttacatcaggacgtctgatggccga
atctttgccatcagagcagctaaggccaagactgcagaggagagtactacagtgccaccc
aaagagtcccaggccccaccaaaggaagtgtcaaccaatggcagtaacggttgcctgtca
cctgacaggatgcagcaggtaccctccaagacagtgccacgccctctatcacctgacagc
ccagagatcattagcgagttgcagcgttacacaggtggcacaggagccggcgccaatgca
ggctccggagttcagccggagaaggcagcagagaacaacttgccttccaccaaaccagtt
cagaccaatggcagcagtgggagcagtgggagcagttttgctagtggaaatgtgagccac
catgatgcctctgtgactaacgtaatccaacctaacatggacgccactgccgctgcccag
gacctgagaacaggctccaagcgcaaaacctccagcccgtccatagatgagctgcccgtt
aagcagccctctgcaggcaaacactcctcagctcctctggcctcacaaggcttccccttc
accgggggctacggccttcctcctctgggcctcaaccccgtcatgttgagtgggtcactg
gggcacccactcttattgggggcaggctcgccttacttccagcccccccacactcaactt
ggggatcccagttacatgtacccagatctgtatggctttggcggagccagcccggtccct
acctcctcctcttctacaacaaccactgctaccgccgtctcatcttcatcatcatcatca
tcatcatcttctgcatcagtcaagggtaccagttcagttccaggagccctgcctcccttc
atgctgagccccagcatggcaggcatggctggaatgctctcgccgggcttctctctctct
tacagtcagtctctggctagcctttacacagggtcgatgcacccaggtggcctgccaggt
acagctgctactcctggtccagccggagccagcttcctctcccagtaccctcccactgct
gcctccagttcgtcctcgtcgtctccttcctccttctctccctcagcacggtctgagggc
caccggggcacagtgctggtgaacggcggtaatgttagcagtgccagcagctcggatgac
gacgatgatgtcattgaggtgaggggacagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (45)   
   KEGG ORTHOLOGY (1)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (60)   

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