KEGG   Larimichthys crocea (large yellow croaker): 104919728
Entry
104919728         CDS       T04659                                 
Name
(RefSeq) cohesin subunit SA-2 isoform X1
  KO
K06671  cohesin complex subunit SA-1/2
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:lco00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    104919728
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lco03036]
    104919728
Chromosome and associated proteins [BR:lco03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    104919728
SSDB
Motif
Pfam: STAG SCD DUF6058
Other DBs
NCBI-GeneID: 104919728
NCBI-ProteinID: XP_010730101
UniProt: A0A6G0I8V0
Position
XXII:17496045..17512428
AA seq 1277 aa
MIAAQDLHTEFQFPQETESQLSSDTDLEDPDGKNAKTGKGLAARRGKKALGDKAKGGGAG
RVPGLGRVNGHHQENGMENMTLFEVVKVGKSATQSVVDDWIEAYKHDRDVALLDLINFFI
QCSGCKGAVSGEMFRNMQNSEIIRKMTEEFDEDSGDYPLTMSGPQWKKFRISFSDFIAVL
VRQCQYSIIYDEYMMDMVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMD
NTQRQYEAERNKVVAKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIA
EIRAICIEEIGVWMKLYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLFYSRELGA
RLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSDEVLTAEDCESVYHLVYSAHR
PIAVSAGEFLFKKLFSHQGPEDEGLPRRGRQSLNGSLIKTTVFFFLESELHEHGAYLVDS
LWECASELLKDWETMISLLLDEPIPGEEALNDRQETALVEIMLCAIRQACECHPPVGRGT
GKRVLTAKEKKTQLDDRTRITEMFAVALPLLLAKYCVDIDKVTNLLQIPKYFDLDIYTTG
RLEKHLDALLRQIWEVQDKHTDTEVLEACSTTYHYFCNEEFTIYNRVDIARSQLLDELVD
KFNRLLEDFLQEGEEPDEDDVYQVLSTLKKISAFHNAHDLSKWDLFTSNYRLLNTGLQNG
DMPEQIVIHAMQCTHYIILWHLAKVSDSSSLKGDMATLRKQMRAFCLMCQRYLNSINTAV
KEQAFTILCDLLLIFSHQIMSSGREQLEPLVYAPDSSLQAELLNFILDQVFIDQDDDSNS
TDGQPDDEASKIEALHKRRNLLSAYCKLIIYNVVEMNTGADIFKQYMRYYNDYGDIIKET
MSKTRQIDKVQCAKTLVLSLQTLFNEMLSDLGFNIDRSSSAFCGIKELARRFSLTFGLDQ
MKTREAIAMLHKDGIEFAFKEPSPHGEGSPPLNLAFLDILSEFSSKLIRQDKRTVHMYLE
RFMTFQMALQREDCWLPLISYRNSLQVGGDDDTMSVISGISSRGSTVRSKKSKPAAASKR
KLPEAEENSCSSTDAVWMNREQNVQTPVMMHSPHLTSTVLRDPKKMRPEESFAAAYTMPT
EQHPHQPVTPQQQTHHHHQAAIDYNTEVTWMLTQRQQAEARQQQERVSMHYAKMRNHMQQ
AIRRGSGLMEDDEEPIVEDVMMSSEDRLEDMNEGMDFDTMDIDLPASKNRRERTELKPDF
FDPSSIMDDSVLNVPMF
NT seq 3834 nt   +upstreamnt  +downstreamnt
atgatagcagcgcaggacttgcacacagagtttcaattccctcaagagacagagtctcag
ttgtcttcagatactgaccttgaggatcccgatggcaaaaatgcaaagaccggaaaaggc
ctggcagccaggagagggaagaaggcgcttggagacaaggccaaaggtgggggagcaggg
agggtccccggccttggccgggtgaacggccatcatcaggagaacgggatggagaacatg
accctgttcgaggtggttaaagtggggaagagcgccacacagtctgttgttgatgattgg
atcgaggcgtacaaacatgaccgggatgtcgctctcttggacttaatcaacttcttcatt
cagtgttctggctgcaaaggcgctgtgagcggagaaatgttcagaaacatgcagaactcc
gaaatcatccggaaaatgacagaggagtttgatgaggacagcggtgactatccattaact
atgtcaggaccacagtggaagaaattcaggataagcttctctgacttcatcgcagtcctg
gtgcgtcagtgtcagtacagcatcatctacgacgagtatatgatggacatggtcatctca
ctgctcaccggcctgtctgactcacaagtcagggcattcagacacacaagcacattagca
gccatgaagttgatgacggccctggtgaacgtggctctgaatctgagcatcaatatggac
aacacgcagagacagtacgaggcggagaggaacaaggtcgttgcaaaaagggccaacgat
cggttggagctcctgttacagaagcgtaaagagcttcaagaaaatcaagatgagattgaa
aacatgatgaacgcaattttcaaaggagtgtttgttcacagataccgtgatgctattgct
gaaatccgagctatttgtattgaggagatcggagtgtggatgaagctgtacagtgacgcc
ttcctcaacgacagttacctgaagtatgtcggctggacgatgcatgacaagcaaggtgag
gtgcggctgaagtgcctgacagctctgcagggtttgttctacagcagagagctcggcgca
cgactggagctcttcacaagtcgcttcaaggaccgcattgtgtctatgactctggacaag
gaatatgatgttgcagtgcaagccattaaactactgacacttgtcttacagagtagtgat
gaggtcctgacagcagaggactgtgagagtgtatatcatctggtttactccgcacatcga
cccatcgctgtgtcagcaggagagtttctgttcaagaagctcttcagccatcaaggtcct
gaggacgagggattacccaggaggggcaggcagagcctcaatggcagccttatcaagact
actgtcttcttcttcctggagagcgagctccacgaacatggggcctacttggtggatagc
ttgtgggagtgtgcgtccgagttgttgaaggactgggagacgatgatcagcctgctgctg
gatgaacccatcccaggagaggaggccctgaatgatcggcaggagacggctctggttgaa
atcatgctgtgtgccattcggcaggcgtgcgaatgccaccctccagtaggcagaggcaca
gggaagcgggtcctgactgcaaaggagaagaaaacacagctggatgatcggacacggatc
acagagatgtttgcagtggcgttgcctctgttactggccaagtactgcgttgatattgat
aaggtgaccaacttgctacaaataccaaagtactttgatctcgacatctacacaactggc
cggttagaaaagcatttggatgccttgttgcggcaaatttgggaggtccaggataagcac
acagacactgaggtcctggaagcctgctctaccacctaccactatttctgcaacgaggag
ttcaccatctacaaccgcgtggacattgcccgctcccagcttctcgacgagctcgtggac
aagttcaatagactcctcgaggacttcctgcaagagggtgaagaaccagatgaagatgac
gtctaccaggttctgtcaaccctcaagaagatcagcgctttccacaatgcacacgacctc
tctaagtgggatcttttcaccagcaactacaggctactcaacaccggtctgcagaacggg
gatatgcctgagcagattgtgattcatgcgatgcagtgcacacattacatcatcctttgg
cacctagcgaaggtttcagacagcagttcattaaagggtgatatggcgacattgagaaag
caaatgagagctttctgcttaatgtgtcagcgttacctaaacagcatcaacacggcagtt
aaagagcaggccttcaccatactatgtgatctgctattgatcttcagtcaccaaattatg
tcttcaggacgggaacaactggagcctttggtctatgcgccagactcttctttgcaggca
gagctgctcaacttcatcctggatcaggtgttcattgatcaggatgatgacagcaacagc
acagacggacagccagacgatgaagccagtaaaatcgaggctctgcacaagcgaagaaac
cttctatctgcctattgcaaattgatcatttacaatgttgtggaaatgaacaccggagca
gatatatttaaacagtacatgaggtattacaacgactatggcgatatcatcaaagaaaca
atgagtaaaacgagacaaatcgacaaagtgcaatgcgcaaagacgcttgtattgagcctg
caaacgttattcaatgagatgttgtctgatctcggcttcaacatcgaccgctcatcgtcc
gcgttctgtggcataaaagagctcgcccgacgtttctcgttgacgtttggcttggatcag
atgaagaccagggaggctatcgccatgctacataaggatggaattgagttcgcttttaag
gaacctagtccccatggagaagggagtccacctctcaatctcgcctttttggacatcctg
agcgaattctccagcaaactaattcggcaggacaagagaacagttcacatgtatctggag
cgattcatgacgttccagatggccctgcagcgagaggactgctggctgcccctcatctcg
tacaggaactccctgcaggtcggaggggacgacgacaccatgtctgtcatcagcgggatc
agcagtcgaggatccaccgtcaggagtaagaagtccaagccagctgctgctagcaaaagg
aaactgcctgaagcagaggagaatagctgcagcagcactgatgcagtctggatgaaccgt
gagcagaacgtgcagacgccagtgatgatgcattcgccccacctcacctctaccgtacta
agggatccaaagaagatgaggccagaggaaagcttcgcggccgcatacactatgccaaca
gagcagcatccccatcagcctgtaactccccagcagcagacacaccatcaccaccaggct
gccatcgattacaacacggaggttacttggatgttgacacagaggcaacaagccgaagcc
cgccagcagcaagagcgggttagcatgcactacgccaagatgaggaaccacatgcagcaa
gcaattcgccgaggctctggactcatggaggatgacgaggagccaatagtggaggatgtg
atgatgtcatcagaggaccgcttggaggacatgaatgagggcatggattttgacacaatg
gacattgatctgccggcatcaaagaatcgcagagaaagaactgaactaaagccggacttc
tttgatccgtcttccatcatggacgattcggttctcaacgttccgatgttctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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