KEGG   Larimichthys crocea (large yellow croaker): 104920625
Entry
104920625         CDS       T04659                                 
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha
  KO
K08536  liver X receptor alpha
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco03320  PPAR signaling pathway
lco04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:lco00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    104920625 (nr1h3)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    104920625 (nr1h3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lco03000]
    104920625 (nr1h3)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:lco03310]
    104920625 (nr1h3)
Transcription factors [BR:lco03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    104920625 (nr1h3)
Nuclear receptors [BR:lco03310]
 1. Thyroid hormone like
  1H. Liver X receptor like receptor
   104920625 (nr1h3)
SSDB
Motif
Pfam: Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 104920625
NCBI-ProteinID: XP_019128975
Position
VIII:4408078..4418436
AA seq 465 aa
MSTLSVTDIPDVGHDENKVFDGASELQLDCMVEESSGSGAMKHDGLLLLADLSHPDDFPP
VLPHNGPSLTEMSSPLAIEPSDIKLDPASGDTSASTDGQPVKRKKGPAPKMLGNEVCSVC
GDKASGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNGRCEMDMYMRRKCQQCRLRKCREA
GMLEQCVLSEEQIRLKKMKKQHEEETARTSTVVTPTPLQETAALDPQQQEMIEKLVAMQK
QCNKRSFLDRPKVTPWPQSQDLQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELT
REDQIALLKTSTIEIMLLETSRRYNPAIDSITFLKDFSYNKEDFAKAGLQFEFINPIFEF
SKGMNDLHLDEAEYALLIAINIFSADRPNVQDHDLVERLQQPYVDALRSYIMIKRPNDHL
MFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVNE
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgtccacgctgtctgtgactgatatcccagatgttggtcatgatgagaataaggtgttt
gatggggcctctgagctgcagctggactgcatggttgaggagagcagtggaagcggcgca
atgaagcacgacggcctgctgttgctggccgacctgtcccacccagacgacttccccccc
gtcctccctcataatggcccttcactgaccgagatgagcagccctctggcgatagaacca
agcgacataaagcttgatccagcttcaggtgacacatctgccagcacagatggtcagcca
gtgaagagaaagaaggggcctgctccgaagatgcttggcaacgaggtgtgcagtgtatgc
ggtgacaaggcctccggttttcattacaatgtgttgagctgcgagggctgcaagggcttc
tttcgacgcagcgttattaaaagtgcccagtactcttgcaagaacaatggccgctgtgaa
atggacatgtacatgcgccgcaagtgccagcagtgtcgtctgcgcaagtgtcgggaggcg
ggcatgctggagcagtgtgtgctgtcagaggagcaaatcagactgaagaagatgaagaag
cagcacgaggaggaaacagcccgcacgtccacagtggtcacccccacccctctacaggaa
actgccgcactggatccacagcagcaggagatgattgagaagctggtggccatgcaaaag
caatgcaacaagaggtctttcctcgaccgaccaaaagtgacaccgtggccacagagtcag
gacttgcagaatcgtgaagtgcgtcagcagcggttcgcccatttcactgaactagcaatc
atgtcggtccaggagattgtggattttgcgaagcagcttcctggtttcctcgagctcacg
agggaggaccagatcgctctactgaagacttctaccattgagattatgttgctcgagaca
tctcggcggtacaatcctgctattgatagcattacgtttttgaaggatttcagctataat
aaggaggatttcgccaaagcaggtcttcagtttgagtttatcaatcccatctttgagttc
tcaaaaggaatgaacgacctgcatctagacgaggccgagtacgccctgctcattgccatc
aacatcttttctgcagatcggccaaacgtgcaggatcatgatctggttgagaggctacag
caaccttatgtggacgccctgcgctcttatatcatgataaagagaccaaatgatcacttg
atgtttccccgtatgctgatgaagctggtgagccttcgtacactaagtagtgtccactcg
gagcaggtttttgcccttcgcctccaggacaagaagcttcccccgctgctctctgaaatc
tgggatgtcaacgagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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