KEGG   Larimichthys crocea (large yellow croaker): 104922457
Entry
104922457         CDS       T04659                                 
Name
(RefSeq) partitioning defective 3 homolog isoform X1
  KO
K04237  partitioning defective protein 3
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04144  Endocytosis
lco04520  Adherens junction
lco04530  Tight junction
Brite
KEGG Orthology (KO) [BR:lco00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    104922457
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    104922457
   04530 Tight junction
    104922457
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lco01009]
    104922457
Protein phosphatases and associated proteins [BR:lco01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104922457
SSDB
Motif
Pfam: Par3_HAL_N_term PDZ PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 104922457
NCBI-ProteinID: XP_027129932
Position
XXIII:17435907..17763233
AA seq 1379 aa
MKVTVCFGRTRVVVPCGDGNVKVLNLIEQAAMRYKKAIAKDPSYWVQVHRLEHGDGGILD
LDDMLCDVVDDKDRLVAVYEEQDPHNGGDGTSASSTGTHSPELFSSDVSSASAFQPYQTN
SEIEVTPTALRSNMPLHVRRSSDPSLAGLPPGEVPVGPEEPSRKNPARWSTTAGLQKHHH
KTTMSTGTSSLERKGRGGHAYRSLPRDASGWTTQFQREMTRSSLSANHPMVDRWLDRQEQ
EEEEEERMKQERRIERIEPVGRADSSLEHSPVLSLESMLTPVKVSNEGGPLGIHVVPFSS
QDVRTQGLLVKRLERGGKAEQERLFKENDCIIKINQGDIRHLRFEQAQNIFRQAMRCPVI
IFHVVPADIKRQYELLSAQSELSPAQSNRVRFSQDSQQPGDRSSLVGSMMSRSGPQAGLN
HNHQGPLAGSTPEPSRRYATLPHTLVSRSSSAPSPSLQRRISTNPSTSSYLKNKGRRFNI
QLKKGPEGLGFSITSRDVPIGGSAPIYVKNILPRGAAIQDGRLKAGDRLLEVSGVDLNGK
SQEEVVALLRATPMGGAVNLSVIRQEDSLLPREVQPEDDDMVLTPDGSQEFMTFEIPLND
SGSAGLGVSVKGNRSKENHTDLGIFVKSIINGGAASKDGRLRVNDQLIAVNGESLHGMTN
QDAMETLRKSMSVEGNKRGMIQLIVARLVSKHNEEAPGSPPVLEHPVNSLLDNHERRISH
SLYETIEGLDNNSTPLPNMIGRIGNYQLSPTVNMPQDDIVMIEDDRPPLLPAHLSDQSSS
SSHDDMGFVGENPVSWIHELPGQNECSLSPDADPDGSFQREGFGRQSMSEKRTKQYENAS
QLEIVKSRKSKSMDLGSAEQEVGPSLGLKKSSSLESLQTAVAEATLNGEINVNRPRSRIA
RGRGCNESFRAAIDKSYEKPGVTTAEEENSMETLDEDTEGSSRSGRESMSTSGDLIVGPG
MNGNLSKDDRQRDRDKGNEKKKPERDKEREKDKDKNKAKKGVLKGLGEMFRFGKHRKDER
PGDRMERKGSSKSKAEDMQASEEETLRMKLEQERIQAKTREFREKQAKEREYAEIQDVVS
RTFSSDEEHTYAGIGSLDSSVDSSSMEPYNHYHLPQSPQSPHLPLSLQDNGPPLEALYAQ
VNKPRNGRPAAPDSSEMAPSNHDRIQRLRHEFQQAKQEEDLEDHRHTYSFNQPWVSNGTE
TQSGRHSVTVETQVQKQQQDDRDGFQQAQRQYSSLPRQPRKNPSTASQESWDKGYMPPEG
FQTSKENPRYSGGQGSRNGYLGTPSFNARVLLETQELLRQEQRRREQEANKARPPPAQET
PSGSTYDHNRDHTQAPGSAPAQAPPQSKGPYRQDVPPSPSQLAKLSRLQGSEKGRLFYS
NT seq 4140 nt   +upstreamnt  +downstreamnt
atgaaagtgacggtttgtttcgggaggacccgggtggtcgttccgtgtggggatgggaat
gtaaaagtcctcaaccttatcgaacaagcagccatgagatataaaaaggcgatcgcaaag
gaccccagctactgggtccaggtccacaggctggaacatggagatggaggcattttagac
ctggacgacatgctgtgtgacgtggtggatgacaaagacaggctggtggcagtatatgaa
gagcaggatcctcacaacggaggggacggtaccagtgccagctccacaggtacacacagc
cctgaactcttctccagtgatgtgagttcggcatcggccttccagccttaccagacgaac
agtgagatcgaagtcaccccgaccgctctgcgatccaatatgcctctccatgtccgtcgc
agcagcgatccatccctggctggtcttcctccaggtgaagtcccagtgggtccagaggaa
ccatccagaaagaacccagctcgctggtctacaactgctggcctccaaaagcaccaccac
aaaacaaccatgagcaccggcaccagcagcctggaacgaaagggtaggggaggccatgcc
tatcgcagtcttcctcgtgatgcaagtggctggaccactcagttccagagagagatgact
cgatcttccctcagtgccaaccatccaatggtggaccgatggcttgaccggcaggaacag
gaggaggaggaagaagagcgcatgaaacaagaaaggagaattgaacggatagagccagta
gggagggctgattcctcattggagcattcacctgtgttaagcctagagagcatgctcacg
ccggtcaaggtgtccaatgaaggcgggcccctggggatccacgtagtgcctttcagttcg
caggatgtcaggactcagggcttgctggtgaagcgtctggagcgcgggggaaaagccgag
caggagcgtctcttcaaggagaacgactgcatcatcaaaattaatcagggagacattcgc
cacctgcgcttcgaacaagcccagaacattttcagacaagcgatgcgttgcccagtcatc
atcttccacgtggtccccgcagacataaagaggcagtatgagctgctttcggcccagagc
gagctcagcccggcccagtccaacagagtccgctttagtcaggactctcaacagcctggg
gacaggtccagtcttgtggggagtatgatgtcaagatctgggccacaagcaggactcaac
cacaatcaccagggacctctggcaggaagcaccccggagccaagtcgacggtacgccacg
ttaccccacaccttggtctccaggagctcgtcagccccctccccgtccttgcagcgcagg
ataagcacaaacccgtccaccagctcctacctgaagaacaaaggtcgcagattcaacatt
cagcttaagaaaggtccagagggtcttgggttcagcatcacatccagagatgtccccatt
ggtggaagtgcccccatttatgtcaaaaacatccttcctcgaggggccgcgatccaagat
ggccggttaaaagctggagaccggctgctggaggttagtggagtggaccttaatggtaag
agccaggaagaggtggtggccctgctccgagccacgcccatgggcggggctgtgaacctg
tcggtgattcgccaagaggactccctgctgcctcgagaagtgcaaccagaagacgatgac
atggtgttaacgcctgatggttcccaagaatttatgacctttgagatccctctgaacgac
tcaggctcagcaggcctgggggtcagcgtcaagggtaaccggtccaaggagaaccacacc
gacttgggcatctttgtgaaatctattatcaatggaggtgctgctagcaaggatgggcgt
ctacgtgtgaacgaccaactaatcgcagtcaacggggagtctttgcatgggatgaccaac
caggacgcaatggaaacactgcgtaaatccatgtctgtagagggcaacaagcgagggatg
attcagctcattgtggcccgactggtgtccaaacacaatgaggaagcccctggcagccct
ccggttttagagcatcctgtgaactctctactggacaaccatgagcgtcggatttcccac
tccctgtatgaaaccatcgaagggttggacaacaactccacaccactgcctaatatgatc
ggacgcattgggaactaccagctctctccgactgttaacatgccgcaggacgacatagtg
atgatcgaggacgataggccacccctgcttcctgcccacctttctgaccaatcgtcctcc
agttcccacgatgacatgggcttcgtgggggagaacccggtgtcctggatccacgagctg
cccggtcaaaatgaatgctcgctcagtccagatgctgacccggacggttcattccagagg
gagggcttcggccgtcagagtatgtcagaaaaacgcaccaaacagtatgagaatgcttct
cagctggagatcgtcaagtcgcgcaagtccaagagcatggatctaggttcggcagaacaa
gaggtcggaccctccctaggcctgaaaaagtccagttcccttgagagcctccagacagct
gttgccgaggcaacgctgaacggtgagatcaacgtgaacagaccacgatcacggatcgcc
aggggccgtggctgcaatgagagcttccgggctgcaattgacaaatcatacgagaaacct
ggtgtcacaacggcagaagaagagaacagcatggagacattggacgaggacacagaggga
agttccaggtcaggtcgtgagtcgatgtccaccagcggagacctcattgtgggccccggg
atgaatggcaacctctccaaagatgacagacagagagatcgggacaaggggaatgaaaag
aagaaacccgaaagggataaagagagggagaaagacaaggacaagaacaaagccaagaaa
ggcgtgctgaaaggcctgggcgagatgttcaggtttggaaagcaccggaaggatgaacgg
ccaggagacaggatggagaggaagggctccagtaaatctaaagctgaggacatgcaggcg
tcagaagaggagaccctgaggatgaagctggaacaagagagaatacaggccaagacgcgg
gagtttcgggagaagcaggcaaaagagagggaatatgctgagatccaagacgttgtcagc
cgcaccttcagttcagatgaggagcacacctacgctggcatcgggtcattagactcatca
gtggatagcagcagcatggagccatacaaccactaccatctccctcagagtccccagagc
cctcaccttcccttgagccttcaggacaacggccctccactggaagctctctatgcacaa
gtcaacaagccgcgcaatggacgccctgcagctccagacagcagtgagatggcccccagt
aaccacgaccggatacaacggctgaggcatgagttccagcaggccaagcaggaggaggac
ctcgaggaccatcggcacacctacagcttcaaccagccctgggtgagcaacgggacggag
acacagagcggacggcattcagtaacagttgagactcaggtccagaaacagcagcaagat
gacagagatggtttccaacaagcacagaggcagtacagctccctgccacggcaacctcgt
aagaaccccagcacggcgtcccaggagtcatgggataagggttacatgccaccagaggga
ttccagacatccaaagagaaccctcgctactccggcgggcagggatcccgaaacggctac
ctgggaacgcccagcttcaacgcccgcgtcctcttagagacacaggagttgctgaggcag
gagcagagacgcagagaacaggaggccaacaaagccaggccacctcctgcacaggaaacc
cccagtggcagcacctacgaccacaacagagaccacactcaggccccaggctctgcccct
gcacaggccccacctcaatccaagggcccctacagacaagacgtacccccgtcgccttct
cagctcgccaagctcagcagacttcagggttcagagaaagggaggctgttttactcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (45)   

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