KEGG   Larimichthys crocea (large yellow croaker): 104923246
Entry
104923246         CDS       T04659                                 
Symbol
rara
Name
(RefSeq) retinoic acid receptor alpha isoform X1
  KO
K08527  retinoic acid receptor alpha
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lco03000]
    104923246 (rara)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:lco03310]
    104923246 (rara)
Transcription factors [BR:lco03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    104923246 (rara)
Nuclear receptors [BR:lco03310]
 1. Thyroid hormone like
  1B. Retinoic acid receptor (RAR)
   104923246 (rara)
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 104923246
NCBI-ProteinID: XP_010734591
Position
XVI:9952385..10086944
AA seq 455 aa
MMYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVPGAPHPYSTSIRNQHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDEKKQECTESYVL
SPDTEQMIDRVRKAHQETFPSLCQLGKYTTTNSSERRVSLDVDLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEQAEKVDVLQEPLLEALK
IYVRRRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGL
ESGAAGGRPSGAPPGSCSPSLSPSSAQSSPATQSP
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgatgtatgagagtgtggacgttgtgggactgaatcccagcccgaacccgtttttaatg
atggattactacaaccagagcagaggatgcttgatcccggagaaaggactggtgcccgga
gcgccccatccctacagcacgtccatcaggaaccagcactggaacggctccaatcactcg
atagagacccagagtaccagctcagaggagatagtgccaagcccgccctcgcctcccccg
ccgccccgcgtctacaagccctgctttgtgtgccaggacaagtcctcagggtaccactat
ggtgtcagcgcctgtgagggctgcaagggcttctttcggagaagcatccagaagaacatg
gtgtacacttgtcaccgggagaagaactgcatcattaacaaagtcacccgcaaccgctgc
cagtactgtcggctgcagaagtgcctggaagtcgggatgtccaaggagtcggtgagaaac
gaccggaacaagaagaaaaaggatgagaagaagcaggagtgcacagagagctacgtgctg
agtcccgacacagagcagatgatcgacagggttcgcaaggcacaccaggaaactttcccc
tctctctgccagttgggcaaatacactacgactaacagctcagaacgacgtgtatccttg
gacgtagacctgtgggacaagttcagcgaactctccaccaagtgcatcataaagacagtg
gagtttgctaagcagctgcccggctttacaacgcttacgatcgcagatcagatcactctg
ctgaaggcagcctgtctggacatcctgatactccgaatctgtacacgctacacaccagag
caagacaccatgactttctcagatggactcacgctaaaccgaacccagatgcacaatgct
ggcttcggtccccttaccgacctggtttttgcctttgccaaccagctccttcctctggag
atggatgatgcagagacagggctactcagcgccatctgtttgctgtgtggagatcgccag
gacttggaacaggcagagaaggtggacgtcctgcaagagcccctcctggaggcgttgaag
atttacgtaaggaggaggaggcctcacaaaccgcacatgttccccaagatgcttatgaag
atcactgatctgaggagcatcagtgctaaaggagctgagcgtgtcatcaccctgaagatg
gagatccccggctctatgcctcctctcatccaggagatgctggagaactcagaaggcctg
gaaagtggggccgcaggcggccggcccagcggtgccccaccaggaagctgcagtcccagt
ctgtcacctagctctgcccaaagcagtccagccacacaatcgccgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (15)   
   RefSeq(pep) (15)   
DNA sequence (15)   
   RefSeq(nuc) (15)   
Protein domain (2)   
   Pfam (2)   
All databases (47)   

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