KEGG   Larimichthys crocea (large yellow croaker): 104927096
Entry
104927096         CDS       T04659                                 
Name
(RefSeq) E3 ubiquitin-protein ligase Mdm2
  KO
K06643  E3 ubiquitin-protein ligase Mdm2 [EC:2.3.2.27]
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04068  FoxO signaling pathway
lco04110  Cell cycle
lco04115  p53 signaling pathway
lco04120  Ubiquitin mediated proteolysis
lco04144  Endocytosis
lco04218  Cellular senescence
lco04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:lco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104927096
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    104927096
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    104927096
  09143 Cell growth and death
   04110 Cell cycle
    104927096
   04115 p53 signaling pathway
    104927096
   04218 Cellular senescence
    104927096
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    104927096
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lco04131]
    104927096
   04121 Ubiquitin system [BR:lco04121]
    104927096
Enzymes [BR:lco01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104927096
Membrane trafficking [BR:lco04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    104927096
Ubiquitin system [BR:lco04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   MDM2/MDM4 proteins
    104927096
SSDB
Motif
Pfam: zf-C3HC4_3 SWIB zf-RanBP zf-RING_2
Other DBs
NCBI-GeneID: 104927096
NCBI-ProteinID: XP_027138275
Position
X:complement(174919..180436)
AA seq 515 aa
MSAARELEADGADDNKLVRPKVEFNTLLRLAGATKDVFTMKEVMFYLGQYIIQKQLYDQK
QQHIVHCSQDALGRVLGVDSFSVKEPRVLFAMITKNLVAVKSPESPQSSSEALSDNQTER
ATEEAESESRSSSPDRRRARRRRRSRRSSDPGPSHSAENAEDEETEEDEEEEGGGRKRRR
SDSLSLTFDGSLSWCVIGGLGSGRDRHSSQSSDSHSLSGRSEVTAAASDSDSDNFSVEFE
VESVASDDYNEDDASLSADDQVYEVTIFEAEDEDSFDEDTEITEADYWRCVKCDELNPPL
PRNCLRCWTLHHDWLPEDITKSASSSPKALPPKPTDQSAAKEAPASDVEENDGVDVPDGK
RSKTPVLSQCLSDSTLSAPDSTSSAPNSQDLLSGSQPSSSCSQQNIWTPDSQPSSSIDSQ
ELLPPSPTDPPPPLPPAPAAAPELERSVSAEWRLPDSCLDPCLICQSRPKNGCIVHGRTG
HLMSCYVCARKLKKRNKLCPVCRLPIQSVILTYLS
NT seq 1548 nt   +upstreamnt  +downstreamnt
atgtccgctgcccgggaactcgaagccgacggcgccgatgacaacaaactggtcagaccc
aaagtcgagtttaacacgttactgcgactcgccggagccaccaaagacgttttcaccatg
aaggaggtgatgttctacctgggtcagtacatcatccagaagcagctctacgaccagaag
cagcagcacatcgtccactgctcccaggatgcactgggccgggtgctgggcgtcgacagc
ttctctgtgaaggagccgagggttctgttcgccatgatcaccaagaacctcgtcgccgtg
aagagccccgagtcgccgcagagctcgagcgaagcgctcagcgacaaccagacagagcga
gcgaccgaggaggcggagtcagagagccgttcttcgtcgcccgacaggaggagagcgagg
aggaggaggagaagccgcaggagcagcgacccaggcccctcccacagcgcagagaacgcc
gaagacgaggagacggaggaggacgaggaggaggaaggaggaggcaggaagaggaggagg
tccgacagcctgtccctcaccttcgatgggagcctgtcctggtgtgtgattggtggactg
gggagtgggcgggacagacacagcagccagtcatcggactcgcacagcctgtcggggagg
tcagaggtcacggccgcagcctcagacagcgacagcgacaacttcagcgtcgagttcgag
gtagagtccgtcgcctccgacgactacaacgaagacgacgcctctctgtcggcggacgat
caggtgtacgaggtcaccatcttcgaggccgaggacgaagactccttcgacgaagacacc
gagatcacggaagctgattactggcggtgtgtgaagtgcgacgagttgaacccgcctctg
cccagaaactgcctccgctgctggacgctgcaccacgattggctgcccgaggacatcaca
aagtccgcctcctccagtcctaaagccctgcccccaaagcccacggaccaatcagcagcc
aaagaagctccagcgtccgacgtcgaggagaacgacggcgtcgacgttccggacgggaaa
agatcgaagactcctgtcctgtctcagtgcctgtcggactccaccctctctgctcctgac
tccacctcctccgctccaaactcccaggacctcctctcaggctcccagccgtcctcctcc
tgctcgcagcagaacatctggactcctgactcccagccctcctcctccatcgactcccag
gagcttctgccgccttccccaacagatccaccacctcctcttcctcctgctcccgccgcc
gcccccgagctggagcgcagcgtgtcggcggagtggcgcctgccggactcgtgcctcgac
ccgtgtctcatctgtcagtcccggccgaagaacggctgcatcgtgcacggacgcaccgga
cacctcatgtcctgctacgtgtgcgcgaggaagctgaagaagaggaacaagctgtgtccg
gtctgcaggctgcccatccagtccgtcatcctcacctacctcagctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (7)   
   KEGG PATHWAY (7)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (48)   

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