KEGG   Larimichthys crocea (large yellow croaker): 104929173
Entry
104929173         CDS       T04659                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 22
  KO
K11366  ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lco01002]
    104929173
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lco03021]
    104929173
   04121 Ubiquitin system [BR:lco04121]
    104929173
   03036 Chromosome and associated proteins [BR:lco03036]
    104929173
Enzymes [BR:lco01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     104929173
Peptidases and inhibitors [BR:lco01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   104929173
Transcription machinery [BR:lco03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     104929173
Ubiquitin system [BR:lco04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    104929173
Chromosome and associated proteins [BR:lco03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     104929173
    SLIK complex
     104929173
SSDB
Motif
Pfam: UCH UCH_1 zf-UBP Peptidase_C98
Other DBs
NCBI-GeneID: 104929173
NCBI-ProteinID: XP_027145027
Position
XVI:complement(6337846..6356090)
AA seq 506 aa
MSPAGCPHVNGFKVDNWKQNLRVIYQCFVWSGSAETRKRKAKSCICHMCGAHLNRLHSCL
YCVFFACFAKKHIHEHAKSKRHNLAIDLLHGGIYCFMCQDYIYDKDMEQIAKEEQRKAWK
MQGIGEKYSTWEPTKRELELLRHNPKRRRITSNCTIGLRGLINLGNTCFMNCIVQALTHT
PLLRDFFLSDRHKCEMQSNSCLVCEMSQLFQEFYSGHRSPHIPFRLLHLVWTHARHLAGY
EQQDAHEFLIAALDVLHRHCKDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVST
TIDPFWDISLDLPGSSTPFWPLSPGGDGSALNGESHTTGATTLTDCLRRFTRPEHLGSSA
KIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMA
SSKESRMNGQYQQTVDPFNNDNKYSLFAVVNHQGTLESGHYTTFIRQHKDQWFKCDDAII
TKASIKDVLDSEGYLLFYHKQFLEYE
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgagtcccgcgggttgccctcatgtcaacggcttcaaagtggacaactggaagcagaac
ctgagggtcatttatcagtgtttcgtgtggagcggttcagccgagaccagaaaacgcaag
gccaagtcatgcatctgccacatgtgcggcgcccacctcaacagactccactcctgcctc
tactgcgtcttcttcgcctgctttgccaaaaaacacatccacgaacatgccaagagtaaa
aggcataacctagctattgacctgctgcacggaggaatttactgttttatgtgccaagac
tacatttatgacaaagacatggaacagattgccaaagaggaacagaggaaagcctggaaa
atgcaaggcataggggagaagtactcgacgtgggagcccaccaagagggagctggagctg
ctccgccacaaccccaagaggaggagaatcacctccaactgtactattggcctgcgaggt
ctgataaacctgggcaacacatgtttcatgaactgcatcgtccaggcgctgacacacaca
ccgctgttacgcgacttcttcctgtcagaccgacacaaatgcgagatgcagagcaactcc
tgtttggtgtgcgagatgtcgcaactcttccaagagttctactcaggccatcggtcgcca
cacatccccttccgcctccttcatctggtgtggacccacgcccgtcacctggccggctac
gagcagcaggacgcccacgagttcctcatcgcggcgttggacgtccttcacagacactgc
aaagacgacaacgggaagaaagccaacaaccccaaccactgtaactgcatcatcgaccaa
atcttcacagggggcctgcagtctgacgtcacctgtcaagtgtgccatggtgtttcgacg
accatagacccgttctgggacatcagcctggacctgccggggtcctccaccccgttctgg
cccctgagcccaggtggagatggatcagctcttaacggagagagtcacaccactggagcc
acaacgctcacggattgtctgcgcaggttcaccaggccagagcacctcggcagcagtgct
aagatcaagtgcagcggttgccatagttaccaggagtccaccaagcagctaaccatgaag
aagctgcctatcgtggcatgctttcacctcaaaaggttcgaacattcagccaaactgcgg
cggaagatcacaacctatgtctccttcccgctggagctggacatgacgcccttcatggcc
tccagtaaagaaagcaggatgaacgggcagtaccagcagactgtggaccccttcaacaac
gacaacaagtatagtctatttgcagtggtgaaccaccaggggacgctagagagtggccat
tacaccaccttcatccgccagcacaaggaccagtggtttaaatgtgacgatgccatcatc
accaaggccagcatcaaggacgtcctggatagtgaagggtaccttttgttttaccacaaa
cagttcctggagtacgagtag

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Ontology (6)   
   KEGG BRITE (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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