KEGG   Larimichthys crocea (large yellow croaker): 104930360
Entry
104930360         CDS       T04659                                 
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
  KO
K04936  potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04270  Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:lco00001]
 09150 Organismal Systems
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    104930360
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:lco04040]
    104930360
Ion channels [BR:lco04040]
 Voltage-gated cation channels
  Potassium channel, calcium- and sodium-activated (KCa/KNa)
   104930360
SSDB
Motif
Pfam: Slowpoke_C BK_channel_a Ion_trans Ion_trans_2 TrkA_N
Other DBs
NCBI-GeneID: 104930360
NCBI-ProteinID: XP_019134386
Position
XVI:16900416..16989685
AA seq 1278 aa
MSRNREKFNPDPSIQISKMNVIIPFSPDVPCDSNGQRMWWAFLASSMVTFFGGLFIILLW
RTLKYLWTVCCHCNAKKKDVHRITTGDGIKRTDKDDPAASEVGWMTSVKDWAGVMISAQT
LTGRVLVVLVFALSIGALVIYFIDSSDPIESCQNFYEDFTLQIDMAFNVFFLLYFGLRFI
AANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKT
SNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNSQALSYWECVYLLMVTMSTVG
YGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVNGRKHIVVCG
HITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPH
DLARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHL
LNIPSWTWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYL
EGVANEMYTEYLSSAFVGLSFPVICELCYVKLKLLLIAIEYKSDRRESSTLINPGNHVKM
QEGTLGFFIASDAKEVKRALFYCKACHDDITDPKRIKKCGCKKLIYSKKPAYKKMRLACC
FDCGRSERDCSCMPVNVRCNLDSPQRDIPLSAVSVNDCSATLRASKNSYNGYIKSIEEDQ
QSALSPKKKQRNGGMRNSPNSSPKIMRHDPLLIPGNEQIESMDENVKKYDSTGMFHWCPS
KDIEKVILTRSEAAMTVLSGHVVVCIFGDVKSALIGLRNFVMPLRASNFHYHELKHIVFV
GSLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASLQD
KECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPENSPVHGLVRQTSVTTGANIP
IITELAPLAKPGKKLPVISFSQDKSSGTSIQMITELVNDSNVQFLDQDDDDDPDTELYLT
QPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEENALRGGYSTP
QTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLNAQN
QCTKRYVITNPPYAFELVPSDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSI
PTTNRTNRNKSRDSRDKQNATRMNRVGQEKTWFTDEPENTHLRTIQIKPVNTLTINQISQ
YKSTSSLIPPIREAEDEC
NT seq 3837 nt   +upstreamnt  +downstreamnt
atgtcgagaaacagggagaaattcaacccggatccatccatccagatatccaagatgaat
gtgatcatcccgttttcaccagatgtgccctgtgacagcaacggccagcggatgtggtgg
gctttcctcgcctcctccatggtcactttctttgggggtctcttcataatcctcctgtgg
agaactctcaaatacctgtggactgtgtgctgccactgtaacgccaaaaagaaggatgtc
catcggatcaccacaggtgatggcatcaagcgcaccgacaaggatgacccggcggccagc
gaggtgggctggatgacctcggtcaaagactgggcaggagtcatgatatctgctcagaca
ctgacaggaagagtcctggtggtgctcgtatttgctctcagcatcggagcccttgttata
tacttcattgattcctctgatcctattgagtcctgtcagaacttctacgaggacttcacg
ttgcagatcgacatggcgttcaacgtcttcttcctgctgtacttcggcctccgatttatt
gctgccaatgacaagctgtggttctggttggaggtgaactcggtggtggacttcttcacg
gttcctccggtgtttgtctcagtgtacctgaacaggagctggctaggcttgaggttttta
agggccttaaggttgatacagttctcagaaattttacagtttttgaatatactgaagaca
agcaactcgataaagctggtgaacctgtgttcaatcttcataagcacatggctaactgca
gcaggcttcattcatttggtggaaaactcaggggatccttgggaaaacttccaaaattcc
caggcactttcctactgggaatgtgtctacttactcatggttactatgtccactgttggc
tatggagacgtttatgcaaaaaccaccctgggtcggctgtttatggtcttcttcatcctt
ggtggtttggccatgtttgcaagctacgtccctgaaatcatagagttaataggaaaccgc
aagaaatatggtggttcctatagtgcggttaatgggagaaagcacatcgtggtctgtggt
catataacacttgagagtgtgtccaactttcttaaagacttcctacacaaggacagggat
gatgtcaatgtagaaattgtttttctccataatatttcccctaatcttgagctggaagcc
ttgttcaagcgacatttcacccaggtggagttttaccaagggtctgtcctaaatccacat
gacctggcccgagtgaagatcgaatcagcagatgcctgtttgattttagccaataagtac
tgtgctgaccctgacgccgaggatgcatccaacatcatgagagtaatttctatcaagaac
taccatccaaagatcaggataatcactcaaatgttgcagtaccacaataaggcccacctt
ttgaacatcccaagctggacctggaaggagggagatgatgccatttgtcttgcagagctg
aaacttggcttcatcgctcagagctgcctggctcaaggcctctccaccatgctggccaac
cttttctccatgaggtccttcatcaagattgaagaagacacgtggcagaagtattaccta
gaaggagtagccaatgagatgtacactgagtacctgtcgagtgcctttgtgggcttgtcc
ttccctgtaatttgcgaactgtgctacgtgaagctgaagctgctactgatagctatagag
tacaagtctgatcgaagggaaagcagcaccctgataaaccctggaaaccacgtgaaaatg
caggaggggaccttgggcttctttattgccagtgacgccaaagaagtaaagagggcgctt
ttttactgtaaagcctgccatgatgacattactgatcccaaaaggataaagaaatgtgga
tgcaagaaattgatatattccaagaagcccgcctacaagaaaatgagactggcatgttgt
tttgattgcggccgctcagagcgggactgctcttgcatgccagttaatgtgcgttgtaac
ttggactcccctcaacgcgacatcccactctctgctgtctctgttaatgattgctcagcc
actttacgtgcctctaaaaatagctataatggatatatcaaatcaattgaagaggaccaa
cagtcggcattgtcgcccaaaaaaaagcagcgtaatggaggaatgagaaattctccaaac
tcctcacccaagataatgagacatgacccgctcctcatcccgggaaacgagcagattgag
agcatggatgagaacgtaaagaaatacgactccacggggatgtttcactggtgcccgtcc
aaagacatcgagaaggtcatcttgacccggagtgaggcagccatgactgttctgagcggt
cacgtggtcgtgtgcatattcggagacgtgaaatctgctctgatcggtctgcgaaacttt
gtcatgcctctgagagcaagcaactttcactaccatgagctgaagcacatcgtgtttgtc
ggctccctcgagtatctgaagcgggagtgggagactcttcataattttccaaaggtctcc
attttacccggcacaccgttgagtcgggcagatctgagggctgtcaacatcaacctctgc
gacatgtgtgtcattctgtcagccaatcagaacaatattgacgatgcatcactgcaggac
aaagaatgcatcttggcgtcactcaacatcaaatccatgcagtttgacgacagcattggg
gtcttgcaggctaattcccaaggcttcacaccaccggggatggatagatcctcacctgaa
aacagcccagtccatggattagtaaggcagacctctgtcaccactggagcaaatattccc
atcataacagaactagcaccattagcaaagccaggcaaaaaactgcctgtgatttcattc
agtcaggataaaagcagtgggaccagcatacaaatgataactgagcttgtgaatgactcg
aacgttcagttcctggaccaagatgacgacgacgacccagacacagagttatacctcact
cagccttttgcctgtgggacggccttcgcagtcagtgtgctggattccttaatgagtgct
acatacttcaatgacaatatcctcaccttgatccggacgctggtaacaggcggggcgaca
ccagagctggaggggctgctggcagaggagaatgcattacggggcggctacagcacgcca
cagaccctggcgaacagggacaggtgtcgcgtggcacagctggccttgtacgacgggccc
tttgccgacctcggggatggtggttgttatggtgacctgttttgtaaagccctgaaaaca
tacaacatgctgtgttttggcatctatcggttacgagacgcacatcttaacgctcaaaac
cagtgtaccaaacggtatgtcataaccaatccaccgtatgcgtttgagctggtgccctca
gacctgatattctgcctgatgcagtttgaccacaacgctggccagtctcgaaccagcctc
tcccactcttcacattcgtcccattcctccagcaaaaagagctcctcggtccactctatc
ccaaccaccaaccgcaccaaccgcaacaaaagcagggactcacgagacaaacaaaatgca
acaaggatgaatagagtgggccaagaaaagacatggtttacagatgagccagagaatacg
cacctgaggaccatacagatcaagcctgtgaatactctcaccatcaaccaaatcagtcaa
tataaatccacaagcagcttgattccacccatcagagaagcagaagacgagtgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (20)   
   RefSeq(pep) (20)   
DNA sequence (20)   
   RefSeq(nuc) (20)   
Protein domain (5)   
   Pfam (5)   
All databases (71)   

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