KEGG   Larimichthys crocea (large yellow croaker): 104933365
Entry
104933365         CDS       T04659                                 
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
  KO
K12876  RNA-binding protein 8A
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco03013  Nucleocytoplasmic transport
lco03015  mRNA surveillance pathway
lco03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104933365 (rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    104933365 (rbm8a)
   03015 mRNA surveillance pathway
    104933365 (rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lco03019]
    104933365 (rbm8a)
   03041 Spliceosome [BR:lco03041]
    104933365 (rbm8a)
Messenger RNA biogenesis [BR:lco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104933365 (rbm8a)
Spliceosome [BR:lco03041]
 Complex C
  Other components
   EJC/TREX
    104933365 (rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 104933365
NCBI-ProteinID: XP_010747091
Position
XIII:complement(33568805..33573210)
AA seq 175 aa
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGARSRIKEEYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDMMGQPISVDWGFVRGPPKNKRRTGGRRRSRSPDRRRR
NT seq 528 nt   +upstreamnt  +downstreamnt
atggcggacgtgctggaccttcatgaagcgggaggcgaggactttcctatggatgaggac
ggtgatgagagcatccacaagttaaaggagaaggccaagaagaggaaaggacgaggcttc
ggctcagaggaaggagccaggtccagaatcaaagaggagtacgacactgtggagcaggac
ggagacgagccgggtcctcagagatctgtggagggctggatcctgtttgtgaccggtgtg
cacgaagaggccacagaggaagacatccatgacaagttttcagagtttggcgaaatcaag
aacctgcatctcaaccttgaccgcagaacgggatacctcaagggttatgcactggtagag
tatgagacgtacaaagaggcccaggcagccatggaaggcctcaacggtcaggacatgatg
ggccagcctatcagtgttgactggggatttgtcagagggccccccaagaacaagaggagg
actggtggacgaagacgcagcagaagtccggataggagacggcgctga

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