KEGG   Larimichthys crocea (large yellow croaker): 104934128
Entry
104934128         CDS       T04659                                 
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase
  KO
K03767  peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco03250  Viral life cycle - HIV-1
lco04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:lco00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    104934128
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    104934128
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:lco03110]
    104934128
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lco04147]
    104934128
Enzymes [BR:lco01000]
 5. Isomerases
  5.2  cis-trans-Isomerases
   5.2.1  cis-trans Isomerases (only sub-subclass identified to date)
    5.2.1.8  peptidylprolyl isomerase
     104934128
Chaperones and folding catalysts [BR:lco03110]
 Protein folding catalysts
  Peptidyl prolyl isomerase
   Cyclophilin
    104934128
Exosome [BR:lco04147]
 Exosomal proteins
  Proteins found in most exosomes
   104934128
SSDB
Motif
Pfam: Pro_isomerase
Other DBs
NCBI-GeneID: 104934128
NCBI-ProteinID: XP_010748013
Position
IX:13141892..13145693
AA seq 165 aa
MGNPRVFFDMTVDGASAGRIVMELRADVVPKTAENFRALCTGEKGFGYKGSTFHRLIPKF
MCQGGDFTNHNGTGGKSIYGEKFADENFQLKHTGMGTLSMANAGPNTNGSQFFICTASTD
WLNGKHVVFGNVVEGIEVVKAIEKHGTKSGTPKAKVVIADCGELK
NT seq 498 nt   +upstreamnt  +downstreamnt
atgggaaacccgcgagttttctttgacatgactgtggatggagccagcgcaggccggatt
gtgatggagctccgggctgacgtggtcccaaagaccgcagagaatttccgcgctctgtgc
accggagagaaaggtttcgggtacaagggctccacgtttcaccgtctcatccctaaattc
atgtgccagggtggagacttcaccaaccacaatggaactggaggtaaatccatctacggg
gagaagtttgctgacgagaacttccagctgaagcacacagggatgggcacactgtccatg
gctaacgctggacccaacaccaacggatcccagttcttcatctgcacagcttcaactgac
tggcttaacgggaagcacgtggtgtttggcaacgtcgtggagggcattgaagttgtcaag
gcgatagagaagcacggcacaaagagcggcacccccaaagccaaggtcgtcatcgccgac
tgtggtgaactaaaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (33)   

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