KEGG   Larimichthys crocea (large yellow croaker): 104934618
Entry
104934618         CDS       T04659                                 
Name
(RefSeq) tubulin alpha-1D chain
  KO
K07374  tubulin alpha
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04145  Phagosome
lco04210  Apoptosis
lco04530  Tight junction
lco04540  Gap junction
lco04814  Motor proteins
lco05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lco00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    104934618
  09143 Cell growth and death
   04210 Apoptosis
    104934618
  09144 Cellular community - eukaryotes
   04530 Tight junction
    104934618
   04540 Gap junction
    104934618
  09142 Cell motility
   04814 Motor proteins
    104934618
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    104934618
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lco03019]
    104934618
   03036 Chromosome and associated proteins [BR:lco03036]
    104934618
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lco04812]
    104934618
   04147 Exosome [BR:lco04147]
    104934618
Messenger RNA biogenesis [BR:lco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104934618
Chromosome and associated proteins [BR:lco03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     104934618
Cytoskeleton proteins [BR:lco04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    104934618
Exosome [BR:lco04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104934618
  Exosomal proteins of other body fluids (saliva and urine)
   104934618
  Exosomal proteins of colorectal cancer cells
   104934618
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 104934618
NCBI-ProteinID: XP_019113782
Position
XIX:9100972..9102640
AA seq 451 aa
MRECLSVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDLVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDLCRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLTIAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKEVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSIGDEGEEEEGEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgaatgcctctctgtccacgttggtcaggccggagtccaaatgggcaacgcatgt
tgggagctctactgcttggagcatggcatccagcctgatggtcagatgcccagtgacaaa
accattggaggaggagacgattccttcaacaccttctttagtgagactggagctggtaaa
catgttcccagagctgtctttgtggacttggagccaactgtcattgatgaggtccgcaca
ggaacttaccgtcagctcttccatcctgagcagctgatcactggaaaggaagatgcagcc
aacaactacgctcgtggtcactacaccatcggcaaagagctcattgacttggttcttgac
aggatccgtaagctggcggatcagtgcacaggtctccaaggtttcctcatcttccactcc
tttggaggaggaactggctctggcttcacttctctgttgatggagcgcctctctgttgac
tatggcaaaaagtccaagttggagtttgccatctatcccgcccctcaggtgtccacagct
gtggtggagccctataactccatcctgaccacccacaccaccctggagcactctgactgc
gccttcatggtggacaacgaggccatctatgacctctgccgcaggaacctggacattgag
cgtcccacctacaccaacctcaacaggttgattggacagatcgtctcctccatcaccgcc
tccctgcgctttgatggtgccttgaatgtggatctgacagagttccagaccaacttggtg
ccttaccctcgtatccactttcctttggtcacctacgcaccagttatctctgcagagaag
gcctaccatgagcagctaacgatagcagaaatcaccaatgcctgctttgagcccgccaat
cagatggtgaaatgtgatcctcgccacggcaagtacatggcctgctgtctgctgtaccgt
ggtgacgtggtacccaaggaggtgaactctgccatcgccaccatcaaaacaaagcgtacc
atccagtttgtggactggtgtcccacaggcttcaaggttggcatcaactaccagcctccc
actgtggttcctggaggagacctggccaaggtgcagagggccgtgtgcatgctgagcaac
accacggccattgccgaggcctgggctcgactcgaccacaagttcgacctgatgtacgcc
aagagggccttcgtccactggtatgtcggagaaggaatggaggagggagagttctcagag
gccagagaggacatggctgccctggagaaggactatgaagaggttggcactgatagcatt
ggggatgaaggagaagaggaggaaggggaatactaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (394)   
   KEGG ORTHOLOGY (1)   
   RefGene (390)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (411)   

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