KEGG   Larimichthys crocea (large yellow croaker): 104935987
Entry
104935987         CDS       T04659                                 
Symbol
ssbp1
Name
(RefSeq) single-stranded DNA-binding protein, mitochondrial
  KO
K03111  single-strand DNA-binding protein
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco03030  DNA replication
lco03430  Mismatch repair
lco03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104935987 (ssbp1)
   03430 Mismatch repair
    104935987 (ssbp1)
   03440 Homologous recombination
    104935987 (ssbp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lco03032]
    104935987 (ssbp1)
   03400 DNA repair and recombination proteins [BR:lco03400]
    104935987 (ssbp1)
   03029 Mitochondrial biogenesis [BR:lco03029]
    104935987 (ssbp1)
DNA replication proteins [BR:lco03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    104935987 (ssbp1)
DNA repair and recombination proteins [BR:lco03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     104935987 (ssbp1)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    104935987 (ssbp1)
Mitochondrial biogenesis [BR:lco03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    104935987 (ssbp1)
SSDB
Motif
Pfam: SSB
Other DBs
NCBI-GeneID: 104935987
NCBI-ProteinID: XP_027128269
Position
XX:3553505..3558704
AA seq 147 aa
MLRSASAQIFRQVVRHQSTDVSLILERSINRVQLLGRVGQDPVMRQADGRNPVTIFSMAT
NEMWRTGEGETTSAGDISQKTTWHRVSVFKPGLRDVAYQYVKKGSRILVEGKLDYGEYVD
KNQVRRQATTIIADNIVFLSDNVRDRT
NT seq 444 nt   +upstreamnt  +downstreamnt
atgttgagaagcgcctcagcacagatcttcagacaggtggtgagacaccagagcacagac
gtcagcctcatcctggagagatcgataaaccgagtgcagctgttaggccgagtgggtcag
gacccggtgatgagacaagcggatggtcgtaaccccgtgaccatcttctcgatggcgacc
aatgaaatgtggcgcaccggagagggagagacgacctcagcaggtgacatcagccagaag
acgacgtggcatcgtgtgtccgtgttcaaaccgggtctgagagacgtggcctaccagtac
gtcaagaaagggtccaggattctcgtggaggggaaactggactacggcgagtatgtggac
aagaaccaagtgagacgtcaggccaccaccatcatcgcagacaacatcgtcttcctgagc
gacaacgtccgagacagaacctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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