KEGG   Larimichthys crocea (large yellow croaker): 104936228
Entry
104936228         CDS       T04659                                 
Name
(RefSeq) endothelial PAS domain-containing protein 1 isoform X1
  KO
K09095  hypoxia-inducible factor 2 alpha
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lco03000]
    104936228
   04131 Membrane trafficking [BR:lco04131]
    104936228
Transcription factors [BR:lco03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    104936228
Membrane trafficking [BR:lco04131]
 Autophagy
  Pexophagy
   Other pexophagy associated proteins
    104936228
SSDB
Motif
Pfam: PAS_3 PAS_11 HIF-1a_CTAD HIF-1 PAS PAS_9 PAS_4 HLH
Other DBs
NCBI-GeneID: 104936228
NCBI-ProteinID: XP_019116438
Position
XI:complement(21272..71508)
AA seq 880 aa
MTADKEKKRSSSERRKEKSRDAARCRRSKETEVFYDLAHQLPLPHSVSSHLDKASIMRLA
ISFLRTRKLIATGCSSCSSRGGDGDEDRQMDSLYLKSLEGFVTVVTSDGDMIFLSENINK
FMGLTQVDLTGHSIFDFTHPCDHEEIRENLSLKTAGSGFGKKGKELNTERDFFMRMKCTV
TNRGRTVNLKSASWKVLHCTGQLKMYDSCPPRGLCGFKEPPLTCAVLMCEPIPHPSNIDT
PMDSKTFLSRHSMDMKFTYCDERVTELMGYTPEDLLGRSIYDFYHALDSDSVTKSHHNLC
TKGQAVSGQYRMLAKNGGFVWVETQGTVIYNSRNSQPQCIVCINYVLSDIEEKSMIFSLE
QTESLFKPRHMSSFFTAGGAGVAGEPGDALFTKLKEEPEDLAQLAPTPGDTIISLDFGRP
PFEEPQQPAGYTQQVSAAAMPPPGPPSWANESHKTASPASGKNPAPVPRDLAKMDSTFTV
QQNPPTGSPTSSLSSCSTPSSPGDYYSSVESDLKVELTEKLFALDTEGNSPANTERDLSD
LDLETLAPYIPMDGEDFQLNPIIPESEPLEGGPAGSMGSNSSLAQKHESFSDIASLFQPL
SSPPHGHYQHQPARSWAAREKRSSGQETVDPRAGSCMMGHMQNPPYQAPASTPLSSMGGR
QNLQWPPDPLLTYQQQPRAAKAYLMDALSGEERLSCQQNMSHLVQKQRSIDNFVQAYRDM
SQARVAMSSRIKRSFTQMSVDENKPSDIIWKKMREDSCVAMDRSLSAGSLAELGMGRMMP
GGMSSCLSSLQQHRKSQYPGNGIGGANEKPFPQKSCSYSQYNMLPSNKTEGIASRLLGPS
FESSCLPELTRYDCEVNVPLQGNLHLLQGCDLLRALDQAT
NT seq 2643 nt   +upstreamnt  +downstreamnt
atgacggcagacaaggagaaaaagaggagcagctcagagcgacgtaaggagaagtctcgg
gatgcggctcgctgcaggcgcagtaaagagacggaggttttctatgacctcgctcaccag
ctgcctttgccccacagcgtcagctctcacctggacaaggcctccatcatgaggttggcc
atcagcttcctgcgcacacgcaagctgatcgccacaggctgcagcagctgcagcagccgc
ggcggcgacggcgatgaggacagacagatggacagtctgtacctgaagtctctggagggc
tttgtcaccgtggtaacgtccgacggcgacatgatattcctgtccgagaacatcaacaaa
ttcatggggctcacgcaggttgacctcaccggtcacagcatctttgacttcacccatcca
tgtgaccacgaggagatcagagaaaacctcagtctgaagaccgccggctccggcttcggt
aaaaaaggcaaagagctgaatactgagcgagatttcttcatgaggatgaaatgcacggtg
accaacagaggacgcaccgtcaacctcaagtcagccagctggaaggtgctgcactgcacc
ggacagctgaagatgtacgacagctgccctccgcgagggctgtgcggcttcaaagagccc
ccgctcacctgcgctgtcctgatgtgcgaacccatcccacacccgtccaacatcgacacg
ccgatggacagcaagaccttcctgagcagacacagcatggacatgaagttcacctactgt
gacgagagggtaacggagttgatgggttacactcctgaggatctgctgggtcgctccatc
tacgacttttaccacgccttggactcggacagtgtcaccaagagccaccacaacttgtgt
accaagggtcaggcggtgagcggtcagtatcgtatgctggctaagaacggaggctttgtc
tgggtagaaacccaaggaactgttatttataacagccgcaactcccagccgcagtgcatc
gtgtgcataaactacgtcctcagcgacatcgaggagaagtcgatgattttctccctggag
cagacggagtccctgttcaagccacgccacatgagcagcttcttcacggctggaggtgcg
ggagtggccggagagccgggagatgccctcttcaccaaactcaaagaggagcccgaggat
ctcgcccagctggcgccaacacctggagacaccatcatctccctggacttcggtcgccct
ccattcgaggagccacagcagccagcaggatacacccagcaggtgtctgccgcagctatg
ccccctccgggacctccgtcctgggccaacgagagccacaagaccgcctctccagcgtca
ggcaaaaacccggctccggttccgagggacttggctaaaatggacagtactttcaccgtg
cagcagaacccgccgacggggagccccacttcgagcctcagcagctgctccacgccaagc
agcccaggtgattactacagctccgtggagagtgacctgaaggtggagctgaccgagaag
ctgtttgctctggacacagagggcaacagtcctgcaaacactgagagggacttgagtgac
ttagacctggagactttggctccttacatcccgatggatggcgaggacttccagctaaat
cccatcatcccagagtcagagcccctggagggtggtccggcaggatccatggggagcaac
agcagcctcgcccaaaaacacgagagcttcagcgacatcgccagcctcttccagcccctg
tcctcccctcctcatggtcactaccagcaccagccggccagatcctgggcggcaagggag
aagagaagcagcggccaggagaccgtggacccccgtgcaggctcgtgcatgatggggcac
atgcagaatcccccgtaccaggctccggccagcacccctctgtcctccatgggtggcagg
cagaatcttcagtggccaccggaccctctgttaacctaccaacaacaaccacgagccgca
aaggcctacctgatggacgccttgtcaggagaggagcgtctgtcctgccaacagaacatg
tcgcatctcgtgcagaaacagagatccatcgacaactttgtacaagcctacagagacatg
agtcaagccagagtggccatgtccagcagaatcaagcgctccttcacccagatgtctgtg
gatgaaaataagccgtcagatatcatctggaagaagatgagggaggacagttgcgttgcc
atggatcgctccctcagtgcaggatcactggcagagttggggatggggcggatgatgcca
ggcggcatgtcctcgtgtctcagctccctgcagcaacacaggaagtctcagtatccagga
aacgggataggcggcgcgaatgagaaaccctttccccaaaagagctgcagctactcccag
tataacatgctgccttcaaacaagaccgagggcatagccagtcgtctgctgggcccttcg
tttgagtcatcctgtctgccggagttgacccgttacgactgcgaggtcaacgtcccgctg
cagggtaacctgcacctcctccagggctgtgacctgctgagagccctagaccaggccacc
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (39)   

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