KEGG   Larimichthys crocea (large yellow croaker): 109139951
Entry
109139951         CDS       T04659                                 
Symbol
hmga1
Name
(RefSeq) high mobility group protein HMG-I/HMG-Y isoform X1
  KO
K09282  high mobility group AT-hook protein 1
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lco03000]
    109139951 (hmga1)
   03036 Chromosome and associated proteins [BR:lco03036]
    109139951 (hmga1)
Transcription factors [BR:lco03000]
 Eukaryotic type
  Other transcription factors
   HMGI(Y)
    109139951 (hmga1)
Chromosome and associated proteins [BR:lco03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    109139951 (hmga1)
SSDB
Motif
Pfam: AT_hook
Other DBs
NCBI-GeneID: 109139951
NCBI-ProteinID: XP_019120915
UniProt: A0A0F8B9L4
Position
XV:complement(8029883..8036838)
AA seq 100 aa
MSDKGTVSPKEKEATEKRGRGRPRKQPQVKTSDEPSGSPTPKRPRGRPKGSKNKTASKGK
KATAAPSAGGKRRGRPKKEEKEEKASQESSEEEEDEEEDQ
NT seq 303 nt   +upstreamnt  +downstreamnt
atgagcgacaaggggacagtctcaccgaaagagaaggaggcaacagagaagagggggcgt
ggaagaccccgtaagcagccccaggtaaagacctctgacgaaccaagtgggtccccgact
ccaaagaggcccagaggacggccgaagggcagcaaaaacaagacagccagcaagggcaaa
aaggcgacggcggctccatctgcaggggggaaacgcaggggaagacctaagaaggaggag
aaggaagaaaaggcgtcccaggaatcatctgaggaggaagaagacgaagaagaggaccag
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (1)   
   Pfam (1)   
All databases (33)   

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