KEGG   Lysobacter capsici: LC55x_1971
Entry
LC55x_1971        CDS       T04162                                 
Symbol
ffh
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
lcp  Lysobacter capsici
Pathway
lcp02024  Quorum sensing
lcp03060  Protein export
lcp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lcp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    LC55x_1971 (ffh)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LC55x_1971 (ffh)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LC55x_1971 (ffh)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lcp02044]
    LC55x_1971 (ffh)
Enzymes [BR:lcp01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     LC55x_1971 (ffh)
Secretion system [BR:lcp02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   LC55x_1971 (ffh)
  Eukaryotic Sec-SRP protein
   LC55x_1971 (ffh)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 CbiA Helicase_RecD cobW AAA_33 AAA_16 APS_kinase YqeC AAA_31 AAA_30 ABC_tran KTI12 GTP_EFTU AAA_14 DO-GTPase1 AAA_19 ATP_bind_1 NACHT Thymidylate_kin AAA SR_plectin_7 DnaB_C TsaE AAA_17 AAA_25 nSTAND3 AAA_28 ATPase AAA_18 6PF2K ResIII ArsA_ATPase
Other DBs
NCBI-ProteinID: ALN85249
UniProt: A0A0S2FP43
Position
2171551..2172918
AA seq 455 aa
MFESLTQRLSGTIERLRGRGRLTEENIRESLREVRIALLEADVALPVVQALIERIKVRAV
GQEVLKSLTPGQALIKVVRDELTTVMGSQASDLNLNVPAPAVILMAGLQGAGKTTTVGKL
AKHLKERRKKKVMVVSADVYRPAAIEQLKQLAEQVDVLFFASDASQKPVDIARAAIADAR
KSYVDVLLIDTAGRLAIDEAMMSEIKALHAAVSPVETLFVVDSMTGQDAATTAKAFSEAL
PLTGVVLTKTDGDARGGAALSVRYVTGRPIKFIGVGEKPDGLDVFHPDRVASRILDMGDV
LSLVEQVEQQVDKDKAQKLAEKVAKGKKFDLNDMKDQLEQMQNMGGLHGLMDKLPGMGQI
PDAVKNQVTGKEVPRMVAIINSMTKKERRNPALLNGSRRARIAKGSGLTPADVNKLMKQY
QQMEKMMSKLSGGGMKGLMRGMKGMMGGRGGMPFR
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgttcgaatccctgacccaacgcctgtccggcaccatcgagcgcctgcgcggccgcggc
cgtctgaccgaagagaacatccgcgagtcgctgcgcgaagtgcgcatcgccctgctcgag
gccgacgtcgccctgccggtggtgcaggcgctgatcgaacgcatcaaggtgcgcgcggtc
ggtcaggaagtgctcaagtcgctgaccccgggccaggccctgatcaaggtcgtgcgcgac
gagctgaccacggtcatgggctcgcaggcctccgacctgaacctcaacgtgccggcgccg
gcggtgatcctgatggccggcctgcaaggcgccggcaagaccaccacggtcggcaagctc
gccaagcacctgaaggaacggcgcaagaagaaggtgatggtggtctcggccgacgtctac
cgtccggccgcgatcgaacagctcaagcagttggccgaacaggtcgacgtgctgttcttc
gcttccgacgcttcgcaaaagccggtcgacatcgcccgcgccgcgatcgccgatgcgcgc
aagtcctacgtcgacgtgttgctgatcgataccgccggccgcctcgccatcgacgaagcg
atgatgagcgagatcaaggcgctgcacgccgcggtgtcgccggtcgaaaccttgttcgtg
gtcgactcgatgaccggccaggacgcggcgaccaccgccaaagccttcagtgaagcattg
ccgctgaccggcgtggtgctgaccaagaccgacggcgacgcgcgcggcggcgccgcgttg
tcggtgcgttacgtcaccggtcgtccgatcaagttcatcggcgtcggcgaaaagcccgac
ggcctggacgtgttccatcccgatcgcgtcgccagccgcatcctcgacatgggcgacgtg
ctgtcgctggtcgagcaggtcgagcagcaggtcgacaaggacaaggcgcagaagctcgcc
gagaaggtcgccaagggcaagaaattcgacctcaacgacatgaaagatcagctcgagcag
atgcagaacatgggcggcctgcacggcctcatggacaagctgccgggtatgggccagatt
cccgacgcggtcaagaaccaggtcaccggcaaggaagtgccgcgcatggtcgcgatcatc
aattcgatgaccaagaaagagcgccgcaacccggccctgctcaacggctcgcgccgcgcg
cgcatcgccaagggctcgggcctgaccccggccgacgtcaacaagctgatgaagcagtat
cagcagatggagaagatgatgagcaagctctccggcggcggcatgaagggcctgatgcgc
ggcatgaagggcatgatgggcggacgcggcggcatgccgttccgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (36)   
   Pfam (36)   
All databases (48)   

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