KEGG   Lysobacter capsici: LC55x_2316
Entry
LC55x_2316        CDS       T04162                                 
Symbol
rpsA
Name
(GenBank) ribosomal protein S1
  KO
K02945  small subunit ribosomal protein S1
Organism
lcp  Lysobacter capsici
Pathway
lcp03010  Ribosome
Brite
KEGG Orthology (KO) [BR:lcp00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    LC55x_2316 (rpsA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:lcp03011]
    LC55x_2316 (rpsA)
Ribosome [BR:lcp03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    LC55x_2316 (rpsA)
  Bacteria
    LC55x_2316 (rpsA)
SSDB
Motif
Pfam: S1 Spt6_S1 PCB_OB
Other DBs
NCBI-ProteinID: ALN85584
UniProt: A0A0S2FQ03
Position
2538404..2540092
AA seq 562 aa
MTESFAELFEASQQYLAKLKPGAIVTGTVVEVRSDVVVINAGLKSEGIVPIEQFRNDAGE
IDVAVGDEVKVALDSIENGFGETVLSREKAKRAMVWDELEEALEKNETITGRISGKVKGG
FTVDIKDVRGFLPGSLVDVRPVRDSAYLEGKELEFKLIKLDRKRNNIVVSRRAVVESEYS
VEREQLMEKLQEGAILKGVVKNLTDYGAFVDLGGIDGLLHITDMAWKRVRHPSEVVEVGQ
ELDVRVLKYDRERNRVSLGLKQLGEDPWDNIARRYPANTRVFGKVSNVTDYGAFVEIEPG
VEGLVHVSEMDWTNKNVNPSKIVQVGDEVQVMVLDVDEERRRISLGMKQVTSNPWETFAA
IHKKGDKVEGQIKSITDFGIFIGLDGGIDGLVHLSDISWNTTGEDIVRNFKKGDTLEAVV
LAVDPERERISLGVKQLEQDPMGQYVASNAKGSIVKGVVKEVDAKGATIELADGIEGYVA
ARDIAKERVEDASTYLKVGQEVEAKIIGTDRKGRSMQLSIKAKDEAEQQEALSDYNHRAS
EASSGTTSLGALLRERLGGKSE
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgaccgaatcatttgccgaactgttcgaagccagccagcaatacctggccaagctgaag
ccgggcgccatcgtcaccggtaccgttgtggaagtccgcagcgacgtggtggtgatcaac
gccggcctgaagtccgaaggcattgtgccgatcgaacagttccgtaacgacgccggcgag
atcgacgttgccgtgggcgacgaagtcaaggtcgcactcgactcgatcgagaacggcttt
ggcgaaaccgtgttgtcgcgcgagaaggccaagcgcgcgatggtgtgggacgagctcgaa
gaggcgctcgaaaagaacgagaccatcaccggccgcatcagcggcaaggtcaagggtggt
ttcaccgtcgacatcaaggatgtccgcggcttcctgcccggttcgctggtggacgtgcgc
ccggtgcgcgactccgcctacctggaaggcaaggaactcgagttcaagctgatcaagctg
gaccgcaagcgcaataacatcgtcgtctcccgccgcgcggtggtcgagagcgagtacagc
gtcgagcgcgaacagctgatggagaagctgcaggaaggcgcgatcctcaagggcgtggtc
aagaacctcaccgattacggcgcgttcgtggacctgggcggcatcgacggtctgctgcac
atcaccgacatggcgtggaagcgcgtgcgtcacccgtcggaagtggtcgaagtcggccag
gaactcgacgtgcgcgtgctcaagtacgaccgcgagcgcaaccgcgtcagcctcggcctc
aagcagctgggcgaggatccgtgggacaacatcgcccgtcgctacccggccaacacccgc
gtgttcggcaaggtcagcaacgtcaccgattacggcgcgttcgtcgagatcgagccgggc
gtggaaggtctggtccacgtgtccgaaatggattggaccaacaagaacgtcaacccgtcc
aagatcgtgcaggtcggcgatgaagttcaggtcatggtgctcgacgtcgatgaagagcgt
cgtcgtatctcgctgggcatgaagcaggtcacctcgaacccgtgggagaccttcgcggcc
atccacaagaagggtgacaaggtcgaaggccagatcaagtcgatcaccgacttcggcatc
ttcatcggcctggacggcggtatcgacggcctggtgcacctgtcggacatcagctggaac
accaccggcgaagacatcgtgcgcaacttcaagaagggcgacacgctggaagccgtggtc
ctggccgtggatccggagcgcgagcgcatctcgctcggcgtcaagcagctcgagcaggac
ccgatgggtcagtacgtcgcttccaacgccaagggctcgatcgtcaagggcgtggtcaag
gaagtcgacgccaagggcgccacgatcgaactggccgatggtatcgagggctacgtcgcc
gcgcgcgacatcgccaaggaacgcgtcgaagacgcctccacgtacctcaaggtcggccag
gaagtcgaagccaagatcatcggcaccgaccgcaagggccgcagcatgcagctgtcgatc
aaggcgaaggacgaagccgagcagcaggaagcgctgtcggactacaaccaccgcgcttcg
gaagcctccagcggcaccaccagcctcggcgcgttgctgcgcgagcgtctgggcggcaag
tccgagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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