KEGG T04162: LC55x

Lysobacter capsici: LC55x_3079

Entry

LC55x_3079        CDS       T04162

Name

(GenBank) outer membrane autotransporter barrel domain protein

K20276

large repetitive protein

Organism

lcp Lysobacter capsici

Pathway

lcp02024

Quorum sensing

Brite

KEGG Orthology (KO) [BR:lcp00001]
09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LC55x_3079

SSDB

Motif

Pfam:

He_PIG Autotransporter Big_9 Cadherin_5 SprB Cadherin_4 NtrZ

Other DBs

NCBI-ProteinID:

ALN86342

UniProt:

A0A0S2FS33

Position

complement(3511186..3517875)

AA seq 2229 aa
MTNMQQQSARHAGGSFVSRLHTVLRSGLFVLCGLAALWAGSAAAAPSAFCPVLTMSVANG
GNQTIDVSTCDGPADFGLAVATYPTPHGSASVQTVAQSVQTLTYTHNGDSALSDTFLVPD
GNGGDITVNVTIAPGVSPLTVSPATINPALGVAYSQTMSTTGGVGPYTYVRTSGALPNGL
NFSNGTFSGTVRQRGNFPIAITVTDSTTPTAISVVKSYQITIPNNQPVIGPDPLPAMTRN
YPYSAQLTSTGGNAPYTYSINSGALPPGLSLSGTGAITGTPTTTGNYSFTVRSVDDSDLG
PGVPAIAFGIKTYNVSVALEPTIVVNPATIPGATVGVAYSQTFTGGGGTAPYTFAISAGA
LPAGLSLNTTSGALTGTPTAAGTFNFTVRATDANSFAGTRAYTLVVAPPVTLIAPTTLPN
GTVAAAYSQAITASGGIAPYTYAITAGALPAGLTLSSAGALSGTPTAGGTFNFTVTATGS
STGTGAPHTGARAYALVIAPPTVLLPATSFAPATVAVAYSANLNPASGGTAPYTYALSAG
ALPPGMSLSSTGTLSGTPTAPGTFNFAVTATDSSTGSGAYSSAPRGYTLQVVNIPPVANP
VSATVAYNSTANPITLNITGGVPTSVAIGTAAAHGTATATGATITYTPTAGYAGPDSFTY
TATNTAGTSAPATVTITVTAPTITVSASGPLTAQIGVAYTQTFTWTGGTSPFSGFAVTGL
PAGLSITGTTATSVTVSGTPSAAGSFALNTSATDSSTGDGPFTIGQAFTLTVSAPTLTLT
PAAGTLNATYGAAYSQTFVAGGGTAPYNYSISAGALPAGLSLDANTGVLSGTPSVTGLFT
FSVRARDSSTGSGAPFARTQNYVMQVAAPTIVIAPPTLPGAQVATAYSQTLSASGGIGAY
TFAVTAGALPPGVSLSSAGTIAGTPSAGGTFNFTVTASDANVQSGSRAYSLTVSAATIVV
SPTTLPGGGVAQAYSQTVTASGGTAGYTFAITAGALPAGLSLASNGTLSGTPSAGGTFNF
TITATDSSTGSGPYTGSRAYSVTIAASTVILPPTTLAAATVTNPYNATVNAATGGTAPYT
YAVSAGSLPPGLSVSSAGVISGTPTAPGSYSFSLRATDSSTGTGPYTSAPQTYALQVNDI
VPVANPVSATVAFNSTANPITLNITGGIPASVAVAAAPAHGTATASGTTITYTPTAGYAG
PDTFTYTATNVAGTSAPATVTITVGNPTITVTASGPLTAQVGSPYSQTFTWAGGTSPYSG
FGVTGLPAGLSVTGTTADSVTVSGTPTAAGSFALNASAADSSTGNGPFTTAQAFTLTVSA
PTLAMTPAPGNLPMNYGVASTINFAASGGSAPYSFSLAAGSLPVGVSFSSAGVLSGTPTV
PGNYNIAVRVLDSSTGAGAPFALQQNYTIVVATPAIAIDPPTLPNGTAAVAYNASLSSTG
GVAPYSYSLLSGALPIGMSFSSAGVFSGIPRSDGNFSVTVQSTDNNGQTGSKVYTFTIDP
AIVTIAPATLPGGTVGLAYNQSLSSSGGIAPYSYSIVSGNLPIGLSFSSAGVLSGTPTTA
GSYTANIRSTDDAGYNTTAPYTIVIADAVPVAVDDSASTLSNAPVTIDVTANDTGIITSI
ALATAPAHGTATVSGTDVIYTPAANYFGSDSFTYTASGPGGTSAPATVTITVNALPVPQG
QPQTATTLSTQPVTIDAATGATGSPFTGVTLLNPPSSGTAVVQGTQIVYTPAATTVGAIA
LTYTLNNAFGPSAPITSTITVNAVPVAQSRRVRTVAGATITVDLVAGATGGPFTGANLVS
LTPASSGTAAVSGSGGSYQLTYTPVIGYSGIAVASFTLNNAFATSAVATIEVEVMPRSDP
SKDAEVLGLLSAQTSATRRFATTQIGNFQQRLEGLHGGGEEGARFDNGLSFSIDPRCRDD
APRTPGNDCRQPMLGDERAAIESKPPVQGTGSRYGLWTGGTLNSGNRDGRSGGASGIDFE
TTGISAGADYRLRDDFALGGGIGYGRDDTEVGQHGSRSKAHGYSAVLYASYHPGKSFYLD
GLLGYQWLSFDSRRFVTDTGGMVTGSRDGNQWFASISAGADYQRDRLRISPYARLDVARA
RLDGYTERGDAQYVLNYRDQDIDTTTTSLGLRMDYIYPVRWGTFAPQLRLEYQHDFQDDS
FATMSYADMVGGPFYRARIDGLDRNRFVFGLGAILQTERDWVLRFEYRGLFGSGNDDDNS
FMINLEKKY

NT seq 6690 nt +upstreamnt +downstreamnt
atgaccaacatgcaacagcagtcagcgcgccatgcgggcggttctttcgtctcgcgcctg
cacaccgtacttcgctccggcctgttcgtgctatgcggactggcggccctatgggccggg
tcggccgcggcggcgccctcggcgttctgccctgtgctcaccatgtcggtcgccaatggc
ggcaaccagacgatcgatgtgagtacctgcgacggaccggctgacttcggcctggccgtg
gcgacgtacccgaccccgcacggctccgcctccgtccagacggtcgctcagagcgtgcag
acgctcacctatacccacaacggcgacagcgcgctcagcgacacgttcctcgtgcccgac
ggcaacggcggcgacatcacggtcaacgtgacgatcgcgccgggcgtcagcccgctcacg
gtcagtccggcgacgatcaatcccgccctgggcgtcgcctacagccagaccatgtccacc
accggtggcgtcgggccctatacctatgtccggaccagcggcgctctgccgaacggtctg
aacttcagcaacggcactttcagcggcacggtgcggcagcgtggcaatttcccgatcgcg
atcaccgtgaccgattcgaccacgccgaccgcgatcagcgtggtgaagtcgtaccagatc
accatcccgaacaatcagccggtcatcgggccggatccgttgccggcgatgacccgcaac
tacccgtattcggcccagctcaccagcaccggcggcaatgcgccgtacacctactcgatc
aatagcggggcgctgccgccgggcttgagcctgagcggcaccggcgcgatcaccggcacg
ccgaccaccacgggcaactacagcttcaccgtcaggtcggtcgacgacagcgatctcggc
ccgggcgttccagcgatcgccttcggtatcaagacctacaacgtcagcgtcgcgctcgaa
cccaccatcgtggttaacccggccaccatccccggcgccaccgtcggcgtcgcctacagc
cagaccttcaccggcggcggcggcaccgcgccgtacaccttcgccatcagcgccggcgcg
ctgccggccggcctgagcctcaacaccaccagcggcgccctgaccggcaccccgaccgcg
gccggcaccttcaacttcaccgtccgcgccaccgacgccaacagcttcgccggtacccgc
gcctacaccctggtggtggcgccgccggtcacgctgatcgctccgaccaccttgcccaac
ggcacggtcgcggccgcttacagccaggcgatcaccgccagcggcggcatcgcgccgtac
acctatgcgatcaccgcgggcgccttgccggccggtctgaccctgagcagcgccggcgcc
ctgagcgggacgccgaccgccggcggcaccttcaacttcaccgtcaccgcgaccggcagc
agcaccggtaccggcgcaccgcacaccggtgcgcgcgcctatgcgctggtgatcgcgccg
ccgaccgtgctgctgccggcgaccagcttcgctcccgccaccgtcgcggtcgcgtacagc
gccaatctcaaccccgccagcggcggcaccgcgccgtacacctacgccctcagcgcgggc
gccttgccgcccggcatgagcctgagcagcacgggcacgctgtcgggcacgccgaccgcc
ccgggcaccttcaacttcgccgtgaccgcgaccgacagcagcaccggcagcggcgcgtac
agttcggccccgcgcggctacaccttgcaggtcgtcaacattccgccggtcgccaatccg
gtctcggccacggtcgcttacaacagcaccgccaatccgatcaccttgaacatcaccggc
ggcgttccgacctcggtggcgatcggcacggcggccgcgcatggcaccgcgacggccacc
ggcgccacgatcacctacaccccgaccgccggttacgccggccccgacagcttcacctac
accgcgaccaacaccgccggcacctcggcgccggccacggtcacgatcacggtgactgcg
ccgacgatcacggtgtccgcgtccggcccgctgaccgcgcagatcggcgtcgcctacacc
cagaccttcacctggaccggcggcacctcgccgttcagcggcttcgcggtcaccggcttg
ccggccggtctgtcgatcaccggcactaccgcgaccagcgtgaccgtcagcggcacgccg
agcgcggccggcagcttcgccctcaacaccagcgccaccgacagcagcaccggcgacggt
ccgttcaccatcgggcaggcgttcaccctgacggtcagcgcgccgaccctgaccctgacg
cccgcggccggcacgctcaacgccacctacggcgccgcgtacagccagaccttcgtcgcc
ggcggcggcaccgcgccttacaactacagcatctcggcgggcgcattgccggccggcctg
agcctggacgcgaacaccggcgtgctgtcgggcacgccgtccgtgaccggcctgttcact
ttctcggtgcgggcgcgcgacagctccaccggcagcggcgctccgttcgcgcgcacccag
aactacgtcatgcaggtggcggcgccgaccatcgtgatcgcaccgcccaccttgccgggt
gcgcaggtcgcgaccgcctacagccagaccttgagcgccagcggcggtatcggtgcgtac
accttcgcggtcaccgctggtgccttgccgcccggcgtgagcctgagcagcgccggcacc
attgccggcacgccgagcgcgggcggcaccttcaacttcaccgtgaccgcgagcgacgcc
aatgtgcaaagcggttcgcgcgcttactccctgaccgtcagcgctgcgacgatcgtggtc
agcccgacgaccctgccgggcggcggcgtggcccaggcctacagccagaccgtgaccgcg
tcgggcggcaccgcgggctataccttcgcgatcaccgccggcgccttgccggccggcctc
agcctggccagcaacggcaccctcagcggtacgccgagcgcgggcggcaccttcaacttc
accatcaccgcgaccgacagcagcaccggcagcggcccgtacaccggttcgcgcgcctac
agcgtgaccatcgcggcctcgacggtgatcctgccgccgaccaccctggccgcggcgacg
gtgaccaacccgtacaacgccaccgtcaacgccgccaccggcggcaccgcgccgtacacc
tacgcggtcagcgccggcagcttgccgccgggcctcagcgtcagcagcgccggcgtgatc
tccggcacgccgaccgcgccgggcagctacagcttcagcctgcgcgcgaccgacagcagc
accggcaccggcccgtacacctcggcgccgcagacctatgcgctgcaggtcaacgacatc
gtcccggtcgccaatccggtctcggccacggtcgccttcaacagcaccgccaatccgatc
accttgaacatcaccggcggcattccggcctcggtggcggtcgccgccgcgcccgcgcac
ggcaccgcgacggccagcggcaccacgatcacctacacgccgaccgccggttacgccggt
cccgataccttcacctacaccgcgaccaacgtggccggcacctcggctccggcgacggtc
acgatcacggtcggcaacccgaccatcaccgtgaccgcctcaggtccgctgaccgcgcag
gtcggcagcccgtattcgcagaccttcacctgggccggcggcacctcgccgtacagcggc
ttcggcgtcaccggtctgccggcgggtcttagcgtcaccggcaccaccgccgacagcgtc
accgtcagcggcacgccgaccgcggccggcagtttcgccctcaacgccagcgcggccgac
agcagcaccggcaacggtccgttcaccaccgcgcaggccttcaccctgacggtgagcgcg
ccgaccctggcgatgactccggcgccgggcaacctgccgatgaactacggcgtcgccagc
accattaacttcgccgccagcggcggctcggcgccgtacagcttcagcctggctgccggt
tcgttgccggtgggcgtgagcttcagttcggccggcgtactcagcggcacgccgacggtt
ccgggcaactacaacatcgcggtgcgcgtgctcgattccagcaccggcgccggcgcgccg
ttcgccctgcagcagaactacaccatcgtggtcgccaccccggccatcgcgatcgatccg
ccgaccctgcccaacggcaccgccgcggtcgcctacaacgccagcctcagcagcaccggc
ggtgtcgcgccgtacagctactcgctgctcagcggcgcgttgccgatcggcatgagcttc
agctcggccggtgtgttctccggcatcccgcgttcggacggcaacttcagcgtgaccgtg
cagtccaccgacaacaacggccagaccgggtcgaaggtctacaccttcaccatcgacccg
gcgatcgtcacgatcgcgcctgcgacgttgccgggcggcaccgtcggtttggcctacaac
cagagcctgagcagcagcggcggcatcgccccgtacagctactcgatcgtctcgggcaac
ctgccgatcgggttgagcttcagctcggccggcgtgctcagcggcaccccgaccaccgcc
ggcagctacaccgccaacatccgctcgaccgacgacgccggctacaacaccaccgcgccg
tacacgatcgtcatcgccgacgcggtgccggtcgcggtcgacgacagcgcgagcaccttg
tcgaacgcgccggtgacgatcgatgtcaccgccaacgacaccggcatcatcacctcgatc
gcgctcgccaccgcgccggcccacggcaccgccacggtcagcggcaccgacgtgatctac
acgccggccgcgaactacttcggcagcgacagcttcacctacaccgccagcggccccggc
ggcacctcggcgccggccacggtcacgatcacggtcaacgccttgccggttccgcagggc
cagccgcagaccgcgaccacgctgtcgacccagccggtcaccatcgacgccgccaccggc
gccaccggctcgccgttcaccggcgtgaccttgctcaatccgccgagctcgggcaccgcg
gtggtgcagggcacccagatcgtctacacgcccgcggccaccaccgtcggcgcgatcgcg
ctgacctacaccttgaacaacgccttcggcccgtccgcgccgatcacctcgaccatcacc
gtcaacgcggtgccggtcgcgcagtcgcggcgggtgcgcacggtcgccggcgcgaccatc
accgtcgacctggtcgccggcgccaccggcggtccgttcaccggcgcgaacctggtctcg
ctgactccggcgtcgtcgggcacggcggcggtcagcggctcgggcggcagctatcaactg
acctacaccccggtgatcggctactccggcatcgcggtcgccagcttcaccctcaacaac
gccttcgccacctcggcggtggcgacgatcgaagtcgaagtcatgccgcgcagcgatccg
tccaaggacgccgaagtgctcggcctgctgtcggcgcagacctcggccacgcgtcgcttc
gccaccacccagatcggcaacttccagcagcgcctggaaggcctgcatggcggcggcgaa
gagggcgcgcgcttcgacaacggcctgagcttctcgatcgacccgcgttgccgcgacgac
gcgccgcgcaccccgggcaacgattgccgtcagccgatgctcggcgacgaacgcgccgcg
atcgagtccaagccgccggtgcagggcacgggctcgcgttacggcctgtggaccggtggt
accttgaacagcggtaaccgcgatggccgcagcggcggcgcgagcggcatcgacttcgag
accaccggcatcagcgccggcgccgactaccgcctgcgcgacgacttcgcgttgggcggc
ggcatcggctacggccgcgacgacaccgaagtcggccagcacggcagccgcagcaaggcc
cacggctacagcgcggtgctgtacgccagctaccacccgggcaagagcttctatctggat
ggtctgctgggttaccaatggctgtcgttcgactcgcgccgcttcgtcaccgacaccggc
ggcatggtcaccggctcgcgcgacggcaatcagtggttcgcctcgatctcggccggcgcc
gactaccagcgcgaccgcctgcggatttccccgtatgcccgcctggacgtcgcccgcgcg
cgcctggacggctacaccgaacgcggcgacgcgcagtacgtgctgaactatcgcgaccag
gacatcgacaccaccaccaccagcctgggcctgcgcatggactacatctacccggtccgc
tggggcacgttcgcgccgcagctgcgcctggaataccagcacgacttccaggacgacagc
ttcgccacgatgagctacgccgacatggtcggcggcccgttctaccgcgcccgcatcgac
ggcctggaccgcaaccgcttcgtgttcggcctcggcgcgatcctgcagaccgagcgcgac
tgggtcctgcgcttcgaataccgcggcctgttcggcagcggcaacgacgacgacaacagc
ttcatgatcaatcttgagaagaagtactga

All links

Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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