KEGG   Lysobacter capsici: LC55x_4195
Entry
LC55x_4195        CDS       T04162                                 
Symbol
ruvB
Name
(GenBank) holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
lcp  Lysobacter capsici
Pathway
lcp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lcp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    LC55x_4195 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcp03400]
    LC55x_4195 (ruvB)
Enzymes [BR:lcp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LC55x_4195 (ruvB)
DNA repair and recombination proteins [BR:lcp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     LC55x_4195 (ruvB)
    RecFOR pathway proteins
     LC55x_4195 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_3 AAA_16 AAA_18 AAA_22 nSTAND3 Mg_chelatase TIP49 Rad17 AAA_14 DUF815 Bac_DnaA NB-ARC NTPase_1 RNA_helicase AAA_2 TsaE AAA_17 AAA_28 TniB AAA_24 AAA_19 AAA_33 Sigma54_activ_2 bpMoxR
Other DBs
NCBI-ProteinID: ALN87445
UniProt: A0A0S2FVX0
Position
complement(4654099..4655133)
AA seq 344 aa
MNDPRIIAPGATREDDAIEASIRPKRLDEYLGQQPVREQLKIYIEAAKQRGEAMDHVLIF
GPPGLGKTTLSHVIANELGVNLRQTSGPVIEKAGDLAALLTNLQPHDVLFVDEIHRLSPV
VEEILYPAMEDYQIDIMIGEGPAARSIKLDLPPFTLIGATTRAGLLTAPLRDRFGITQRL
EFYNAEELTRIVRRSSQILGIACAPEGAAEIARRSRGTPRIANRLLRRVRDYAQVRAGGF
IDRDVADAAMLMLKIDPEGFDDLDRRLLRTIIESFDGGPVGVESLAAALSEERGTLEDVI
EPFLIQQGYLIRTARGRMATPKAYRLMGLKPRVENVSLFDQEPE
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgaacgatccgcgcatcatcgccccaggcgccacccgcgaggacgacgccatcgaggcg
tcgatccggcccaagcgcctggacgaatacctcggccagcaaccggtgcgcgagcagctc
aagatctacatcgaagcggccaagcagcgcggcgaggcgatggatcacgtgctgatcttc
ggcccgcccggcctgggcaagaccacgctgagccacgtcatcgccaacgaactgggcgtc
aacctgcgccagacctccggcccggtgatcgaaaaggccggcgacctggccgcgctgctg
accaacctgcagccgcacgacgtgctgttcgtcgacgaaatccaccgcctctcgccggtg
gtcgaggaaatcctgtatccggcgatggaggactaccagatcgacatcatgatcggcgag
ggccccgccgcgcgctcgatcaagctcgacctgccgccgttcaccctgatcggcgcgacc
acccgcgccggcctgctgaccgcgccgctgcgcgaccgcttcggcatcacccagcggctg
gagttctacaacgccgaggagctgacccggatcgtgcgccgctcctcgcagatcctcggc
atcgcctgcgcgcccgagggcgcggcggaaatcgcccggcgttcgcgcggcaccccgcgc
atcgccaaccgcctgctgcggcgggtgcgcgattacgcccaggtccgcgccggcggtttc
atcgaccgcgacgtcgccgatgcggcgatgctgatgctcaagatcgatccggaggggttc
gacgacctcgaccggcgcctgctgcggaccatcatcgaatccttcgacggcggcccggtc
ggggtggaatcgctggccgccgcgctcagcgaggagcgcggcacgctcgaagacgtgatc
gagccgttcctgatccagcagggctatctgatccgcaccgcgcgcggccgcatggccacg
cccaaggcctaccgcctgatgggcctgaagccgcgggtggaaaacgtcagcctgttcgac
caggagcccgaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (29)   
   Pfam (29)   
All databases (39)   

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