KEGG   Lysobacter capsici: LC55x_5215
Entry
LC55x_5215        CDS       T04162                                 
Name
(GenBank) uvrD/REP helicase N-terminal domain protein
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
lcp  Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:lcp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcp03400]
    LC55x_5215
Enzymes [BR:lcp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LC55x_5215
DNA repair and recombination proteins [BR:lcp03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LC55x_5215
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_12
Other DBs
NCBI-ProteinID: ALN88462
UniProt: A0A0S2FXT4
Position
complement(5800995..5802914)
AA seq 639 aa
MLAGAGSGKTRVIVEKIAHLIASGRMPAKRIAAITFTNKSAKEMRERVAKRIKGDGAEGL
TICTFHALGLKFLQFEHAKLGLRRGFSVFDSDDSNAQIKDLLPAGTKPDVIDDMRNLISR
AKNAGLSPEQALAESRSPREMEAAVLYQLYQARLSTFNAVDFDDLIRLPVQLLEADPEVQ
LAWRERIGYLLVDECQDTNDAQYRLLKAIAGPRGLFTCVGDDDQSIYAWRGANPDNLLEL
GKDYPNLEIIKLEQNYRCSNRVLRAANALIANNPHEHPKTLWSDQADGERIRVWECRDSA
HEAEKVAAEIQFLAQKNEAPWMDFCILFRGNHQSRALEKALQLLRVPYHLSGGTAFLERH
EVKDALSWLRLIANPDDDAAFLRAVTSPKREIGATTLAKLAEMAQHAQMPMSRMAESINA
IKQLTPRAGNALDGFVQIVRFLRSEAQKISPAELVGVLAERSGLLASIRAQCKDEASFQR
RKENLAELSGWFDGGKGSGPGELAAQLALLSHADKGDAGNQVRLMTLHAAKGLEFRYVFI
VGVEDGNLPHDASLDEGHLDEERRLMYVGITRAKEALYLSYARETQRWGERIRLKPSRFI
DELPAEEMQRDGADPVADAARKHERATAGFAAIKALLEG
NT seq 1920 nt   +upstreamnt  +downstreamnt
gtgctggccggcgccggcagcggcaagacccgcgtgatcgtcgagaagatcgcccacctg
atcgcctcgggccggatgccggccaagcgcatcgccgcgatcaccttcaccaacaagtcg
gccaaggaaatgcgcgagcgcgtggccaagcggatcaagggcgacggcgccgaaggcctg
accatctgcaccttccacgcgctggggctgaaattcctgcagttcgaacacgccaagctc
ggcctgcgccgcggcttcagcgtgttcgacagcgacgacagcaacgcccagatcaaggac
ctgctgccggccggcaccaagcccgacgtgatcgacgacatgcgcaacctgatctcgcgc
gcgaagaacgccggcttgtcgccggaacaggcgctggccgaatcgcgcagcccgcgcgag
atggaagcggcggtgttgtaccagctgtaccaggcgcgtttgagcacgttcaacgcggtc
gatttcgacgacctgatccgcctgccggtgcagttgctggaagccgaccccgaggtgcag
ctggcctggcgcgaacgcatcggttatctactggtcgacgagtgccaggacaccaacgac
gcccagtaccgcctgctcaaggccatcgccgggccgcgcggcctgttcacctgcgtgggc
gacgacgaccagtcgatctacgcctggcgcggcgccaacccggacaatctgctggagctg
ggcaaggattatccgaacctggaaatcatcaagctcgaacagaactaccgttgcagcaac
cgagtgctgcgcgcggccaacgcgctgatcgccaacaacccgcacgaacaccccaagacc
ctgtggagcgatcaggccgacggcgagcgcatccgggtgtgggaatgccgcgacagcgcc
cacgaggcggagaaggtcgccgccgagatccagttcctggcgcagaagaacgaagcgcct
tggatggatttctgcatcctgttccgcggcaaccaccaaagccgcgcgctggaaaaagcc
ctgcagttgctgcgcgtgccgtatcacctcagcggcggtaccgcgttcttggaacggcat
gaggtcaaggacgcgctgtcgtggctgcggctgatcgccaaccccgacgacgacgcggcg
ttcctgcgcgcggtcacctcgcccaaacgcgagatcggcgcgaccaccctggccaagctg
gccgagatggcccagcacgcgcagatgccgatgtcgcgcatggccgaatcgatcaacgcg
atcaagcagctgaccccgcgcgccggcaatgcgctcgatggcttcgtgcagatcgtgcgc
ttcctgcgcagcgaagcgcagaagatcagcccggccgaactggtcggcgtgctggccgaa
cgcagcggcctgctggcgtcgatccgcgcccagtgcaaggacgaggcctcgttccagcgg
cgcaaggaaaacctggccgagttgtcgggctggttcgacggcggcaagggctcgggtccg
ggcgaactggccgcgcagctggccttgctgtcgcatgccgacaagggcgacgccggcaac
caggtgcgcctgatgaccctgcatgcggccaaggggctggagttccgttacgtgttcatc
gtcggcgtggaagacggcaacctgccgcacgacgccagcctggacgagggccacctcgat
gaggaacggcgcctgatgtacgtgggcatcacccgcgccaaggaagcgctgtacctgtcg
tatgcgcgcgaaacccagcgctggggcgagcgcatccggctcaagccgagccgcttcatc
gacgaactgccggccgaggagatgcagcgcgacggcgccgacccggtcgccgatgcggcg
cgcaagcatgagcgcgctacggcggggtttgcggcgatcaaggcgttgttggaggggtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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