KEGG   Lactobacillus crispatus: LCRIS_00553
Entry
LCRIS_00553       CDS       T01222                                 
Symbol
rumA1
Name
(GenBank) RNA methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
lcr  Lactobacillus crispatus
Brite
KEGG Orthology (KO) [BR:lcr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lcr03009]
    LCRIS_00553 (rumA1)
Enzymes [BR:lcr01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     LCRIS_00553 (rumA1)
Ribosome biogenesis [BR:lcr03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LCRIS_00553 (rumA1)
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_31 Cons_hypoth95 Methyltransf_15 Met_10 MTS RrnaAD DOT1
Other DBs
NCBI-ProteinID: CBL50000
UniProt: D5H1W5
Position
553715..555064
AA seq 449 aa
MKKNQIIDLEITDLSYEAMGVAHYEGMTVFVTNALPGEVVSAKILKVKKNFAFAKIEEIK
KESPDRVKIKLNQWVQTGLASLAHIKYDKQLEFKRNQVVNLLKKAHLDEIEVGQTLPSPE
QTGYRNKAQVPVREYNGQLEIGFFRRHSHDLVPLTNFFTTDPEIDRVLVAVRDVLRKYKI
APYDEVNNTGIIRYLDVRRSKANGEIMVILVSRVKDFPQMTGVAAEISQIPKVSGLVLNY
NPKKTNVILGKKDYLVFGNDQITDQIGDLKFRISPQSFFQINSLQTPRLYDLAIKQADLG
SDDVVIDAYSGIGTIGLSVAKHVKAVRGIEVVRDAIKDAKDNAELNGIENAKYYLGKAEE
IMPRWAKKGMKTDVVFVDPPRKGLTPEFINATVKTGPKKVVYISCNPATMIRDLLLFQEQ
GYEFKRIDPVDMFPQTPHVEAVTVLTKKK
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgaaaaagaatcaaattatagatttagaaattaccgatctttcgtatgaagcaatgggt
gtggcccattacgagggaatgaccgtatttgttactaatgcacttccaggtgaagtggtt
agtgcaaagattttaaaggttaagaagaactttgcttttgctaaaattgaagaaataaaa
aaagaaagtcctgatcgagttaagatcaagttgaatcaatgggttcaaacgggactcgct
tctttagctcatatcaagtatgataagcaacttgaattcaagcgtaatcaagttgttaac
ttacttaagaaggcacatttagatgagattgaagtaggacaaactttgcctagtcctgag
caaacagggtatcgcaacaaggcccaagttcctgtgcgagaatataatggacagcttgag
attggcttttttagacgacattcacatgatttagtgcctttgacaaatttctttaccact
gatccggaaattgatcgtgtattggttgcagtgcgtgatgtgttgcgcaagtacaagatt
gcgccttatgacgaggtaaacaatacgggaattatacgctatcttgatgtgcgtcgtagt
aaggctaatggcgagataatggttattttggtcagccgggttaaggatttcccacaaatg
acgggtgttgcagctgagattagccagattcctaaggtttcaggtttagtcttgaactat
aatcctaagaagaccaatgtgattttgggtaaaaaggattacctagttttcggtaatgac
cagattactgatcaaattggtgatttaaagtttagaatctcacctcaaagtttcttccag
attaattcgctgcaaacaccgcgcttgtatgatttagcgattaagcaagcagatttaggt
tcggatgatgtagtaattgatgcatattcgggaattggaacgattggtttgagtgtagct
aagcatgtgaaggccgtgcgtggaatcgaagttgtccgggatgcgatcaaggatgccaag
gacaatgccgagctaaatggtattgaaaacgcaaagtattacttaggcaaggctgaagaa
ataatgccgcgttgggctaaaaagggtatgaagaccgatgtggtttttgttgatccaccg
agaaaagggttgacacctgaatttattaatgcgacagttaagactggacctaagaaggtc
gtttatatttcgtgcaatcctgcaacaatgattcgcgacttgcttttgttccaagaacaa
ggttatgaatttaagcgaatcgatcctgttgatatgttcccacaaacgccacatgtagag
gctgtgactgttttgacaaagaagaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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