KEGG   Lactobacillus crispatus: LCRIS_00691
Entry
LCRIS_00691       CDS       T01222                                 
Symbol
uvrA1
Name
(GenBank) UvrABC system protein A
  KO
K03701  excinuclease ABC subunit A
Organism
lcr  Lactobacillus crispatus
Pathway
lcr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lcr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LCRIS_00691 (uvrA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcr03400]
    LCRIS_00691 (uvrA1)
DNA repair and recombination proteins [BR:lcr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LCRIS_00691 (uvrA1)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LCRIS_00691 (uvrA1)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 RsgA_GTPase nSTAND3 nSTAND1 AAA_29 AAA_23 AAA_22 AAA_33 DnaJ_CXXCXGXG AAA_21 AAA_14 AAA_18 APS_kinase T2SSE Viral_helicase1 AAA_25 NACHT RNA_helicase SLFN-g3_helicase DUF1924 AAA_24 cobW MMR_HSR1 AAA_15 DUF87 Septin dNK
Other DBs
NCBI-ProteinID: CBL50138
UniProt: D5H2A3
Position
694043..696883
AA seq 946 aa
MANDKIVIRGAREHNLKDINLTIPKDKLVVITGLSGSGKSSLAFDTLYAEGRRRYVQSLS
SYARQFLGQMDKPDVDSIDGLNPAISIDQKTTSHNPRSTVGTVTEINDYLRLLWARVGHP
ICPNDGTLIQRQSVDQMVDRVMALPERTKIQILAPVIRAKRGEHKEVFKRVQRAGYVRVI
VDGEMHEIGEDFELAKNKRHSIDIVVDRLIVKDSIKSRLFDSVEAALRLSDGYMNVDVIG
GEMLNFSEYYACPKCGFTVGEMEPRLFSFNAPFGACPDCDGLGMKLAVDEDLVVPDKTKS
LAEGALAPWKTSNYYTEMLEQACTALKIPMDKPFNKLTKRQRDIILHGSTKPVKFHVTGD
FGVNDTVQPFEGVMANVERRYKRPMSKFMRDVMGKYMTELTCSTCHGKRLNEKALAVKVM
GKDIAEASELSIDKALDFFKDVKLSEQETMIAKPILKEVRDRLSFLDSVGLDYLTLSRSA
NTLSGGEAQRIRLATQIGSNLSGVMYVLDEPSIGLHQRDNDRLIASLKRMRDLGNSLIVV
EHDDETMRQADYLVDMGPGAGVYGGKVMAQGTPKEVEQNPDSLTGQYLSGKKIVPVPLKR
RKGNGKKITITGAQENNLKNINVDFPLGKFIVVSGVSGSGKSTLVNMILKRALAQKLNNN
STKPGKYKSIKGYKNIEKIIDIDQSPIGRTPRSNPATYTSVFDDIRTLFAQTNEAKLRGY
TKARFSFNVKGGRCEACHGDGIIKIEMNFLPDVYVPCEVCHGTRYNSETLEVTYRGKNIA
QVLDMTINEATKFFENIPKIQRKLQTIVDVGLGYVKLGQSATTLSGGEAQRMKLAAELQK
LSTGKNFYILDEPTTGLHTDDIKRLLEVLQRLVDEGNTVLIIEHNLDVIKNADWLIDLGP
EGGERGGQIVATGTPEEVAKVKESYTGQYLKPVLERDTKLTKEAKK
NT seq 2841 nt   +upstreamnt  +downstreamnt
atggcaaatgataagatcgttattcgcggagcacgtgaacataatttaaaagacattaat
ttaactattcctaaggataagttagtagttattactggcttatctggttcaggtaaaagt
tctttagcctttgatacgctttatgcagaagggcgtagacgttatgtgcaatcactttct
agttatgctagacagtttttggggcaaatggataaaccagatgtggattcaattgatggt
ttaaatccagcaatttcaattgatcaaaaaacaacgtcacataatccacggtcaacagtt
gggaccgtcactgagattaatgattatttacgtttgctttgggccagagtaggccatcca
atttgtcctaatgatgggacgctgattcaacgacaatcagttgatcagatggttgaccga
gtgatggctttaccagaaagaacgaaaattcaaattttagcgccagttattcgtgctaag
cgtggagaacacaaggaagtatttaagcgagtacaacgtgcaggatatgttcgtgtaatt
gttgatggtgagatgcacgaaattggtgaggattttgaattagctaagaacaagcgccac
tcaatcgatattgtcgttgaccgtttgattgttaaggatagcattaagtctcgcttattt
gattctgttgaagctgcacttcgtttgtcagatggctacatgaatgttgatgtaattggc
ggtgaaatgcttaacttttctgagtattatgcttgtccaaagtgtggctttactgtgggt
gaaatggaaccaagactgttctcctttaatgcaccatttggtgcctgccctgattgtgat
gggttagggatgaagttagcagtagacgaagatttggttgttccggacaaaacaaaatct
ttagctgaaggtgcactggctccatggaagacttccaattactatactgaaatgttggaa
caagcttgcacggcattaaaaattccgatggataagccttttaataaactaactaaacgt
caacgcgacattattctgcatggctcaactaagccggtgaaattccatgtaactggtgac
tttggcgttaatgataccgttcaaccatttgaaggagtaatggccaatgttgagcggcgt
tataaacgaccaatgtccaagtttatgcgtgatgtgatgggcaaatatatgactgaactt
acttgttcaacttgtcacggcaagcgtttgaatgaaaaagcattagcagtgaaagtcatg
ggcaaggatatcgcggaagcttcggagctttctattgataaagcacttgatttctttaag
gacgtcaaattaagcgagcaagagactatgattgctaagccaattttaaaggaagtacgc
gatcgtctttcattcttggatagtgtaggattagattatttaactctttctcgatcagct
aataccttgtctggtggtgaagctcagcgtattcggttggcaactcaaattggctcaaac
ttatcgggagttatgtatgttttggatgaaccatctatcggtttgcatcaacgcgataat
gatcggctgattgcttctttaaagagaatgcgtgatttaggcaattctttaattgtggta
gagcacgatgacgaaacaatgcggcaagctgactatttggttgatatgggacctggtgcc
ggtgtttacggtggtaaagttatggcacaaggaactcctaaagaagtagagcagaatcct
gattctttaacggggcaatatttgtctggtaaaaaaattgtgccggttccattgaagcgt
cgtaaaggcaatggtaaaaagattacaattactggagctcaagaaaataatttaaagaat
attaatgttgattttccgttgggcaaatttattgtggtcagtggtgtctcaggttctggt
aaatctactttggttaatatgatcttgaaacgcgctttagcccaaaaattaaacaataat
tcaactaagccaggcaaatataagtcaatcaagggttacaagaatattgaaaaaattatc
gatatcgatcaaagccctattggtagaacaccacgtagtaatcctgcaacttatactagt
gtttttgatgatatcagaaccttatttgctcaaactaatgaagcaaaattgcgtggttat
actaaagcaagattttcgttcaacgtcaaaggtggacgttgtgaagcctgtcatggtgat
ggaattatcaagattgaaatgaactttttgcctgatgtatatgtaccatgtgaggtttgt
cacggcactcgttataattctgaaacattggaagtaacttatcggggaaagaatattgct
caagtgcttgatatgacgattaatgaagcaactaagtttttcgaaaatattcctaagatt
cagcgtaaactccagactatcgttgatgtaggtttgggctatgtgaaattaggtcaatcc
gctacaactttatctggtggtgaagctcaaagaatgaaattagctgctgaattgcaaaag
ctttctactggtaaaaatttctatattcttgatgaaccaactaccggtttgcataccgat
gatatcaagcgtttattagaagttttgcagcggttggtagatgaaggcaatacggtttta
attattgagcataatcttgatgtaattaaaaatgcagattggctgatcgacttaggtcct
gaaggaggggaacgtggcggtcaaattgtggctaccggtacgccagaagaagtagcgaaa
gttaaagaaagctatactggtcagtatttgaaaccagtcttagaacgcgatactaaacta
acaaaagaagcaaaaaaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (31)   
   Pfam (31)   
All databases (39)   

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