KEGG   Lacticaseibacillus paracasei BD-II: LCBD_1611
Entry
LCBD_1611         CDS       T01955                                 
Symbol
gyrA
Name
(GenBank) DNA topoisomerase IV (Subunit C)
  KO
K02621  topoisomerase IV subunit A [EC:5.6.2.2]
Organism
lcs  Lacticaseibacillus paracasei BD-II
Brite
KEGG Orthology (KO) [BR:lcs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lcs03032]
    LCBD_1611 (gyrA)
   03036 Chromosome and associated proteins [BR:lcs03036]
    LCBD_1611 (gyrA)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lcs02048]
    LCBD_1611 (gyrA)
Enzymes [BR:lcs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     LCBD_1611 (gyrA)
DNA replication proteins [BR:lcs03032]
 Prokaryotic type
  DNA Topoisomerases
   LCBD_1611 (gyrA)
Chromosome and associated proteins [BR:lcs03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    LCBD_1611 (gyrA)
Prokaryotic defense system [BR:lcs02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    LCBD_1611 (gyrA)
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C Polysacc_lyase
Other DBs
NCBI-ProteinID: AEA57108
UniProt: A0A806E3P8
Position
1560115..1562559
AA seq 814 aa
MANQIQELTLEEVMGDRFGRYSKYIIQERALPDVRDGLKPVQRRILFAMNQDGNTYDKGF
RKSAKSVGNVMGNYHPHGDSSIYEAMVRLSQDWKLRAPLIQMHGNNGSMDGDPPAAMRYT
EARLSKISKEMLADIDKETVDMVLNFDDTAQEPTVLPAGFPNLLVNGATGISAGYATEIP
PHNLREVINAVLYLLKHPTADLDTLMQYVKGPDFPTGGIIQGLDGIKQAYETGRGKIVVR
SRTHIETIRGGREKIVVTEIPYDVNKAQMIKKIDELRINKKVDGIAEVRDESDRFGLSVV
IELKKEADAHGILNYLFKNTDLQIAYNFNMVAIADMQPKLLGLKAMLEAYVEHRRDVVTR
RTRFDLNKAAARQHIVEGLIKMLSILDQVIAAIRASKDKGDAKRNLVKKFDFSEAQAEAI
VSLQLYRLTNTDITALQKEAAQLAKAIAEYQDILARPAARDRVIEGELKRIAKEYGDDRR
SSIQAKIETLEVATTVTVADETVMVQVSRDGYVKRSSLRSYQAVDPADNGLKANDLAIFT
GELSTLQHLYIVTNAGNVIYRPVHEISDARWKDTGEHLSQTVGLGTDEKVLAVFAFDQLD
GAGSFVLGSSDGYIKQTALSDLQPQRTYKSKPMMAMKLKDPAAIVTNAYFTTDQQQDVFV
VSRHAYGLTFPLSDVSTVGARATGVKSMDLKPDDEVVNFILVKDPTTAKVGILTQRGAFK
KMALSEVGEMSRARRGLLVLRELKRDPHRIVAMMSVDDATRLNVLTDTGKVTTLNPAQHP
AGDRYSNGSFVIDTDVLGKPVFVQTKEEPADQVE
NT seq 2445 nt   +upstreamnt  +downstreamnt
ttggccaatcagattcaagaactgaccttagaagaggtcatgggcgaccggtttggccgg
tactcgaaatacattattcaagaacgggcgctgcctgatgtgcgtgacggcctcaaaccg
gttcagcgtcgcattttatttgcgatgaaccaagatggcaatacgtatgataagggcttc
cgcaagtcggctaaaagtgtcgggaatgtcatgggtaattatcatccccacggcgacagc
tccatttatgaagcgatggttcggctgagccaggattggaagttacgggccccactgatt
cagatgcacgggaataacggttccatggatggtgatccgccagctgcaatgcgatatacg
gaagcgcgtttaagcaaaatcagcaaggaaatgctggccgatatcgataaggaaaccgtc
gatatggtgttgaactttgatgacacggcacaggagccaactgtgttgcccgcaggattt
ccgaatttgctggtgaatggtgcaacgggcatctctgcaggttacgcgaccgaaattccg
ccgcataacttgcgcgaagtgatcaatgcggtcttatatttgctgaagcatcccactgct
gatttagatactttaatgcaatacgtcaagggtcccgattttccaacaggtgggattatt
caagggcttgatggtatcaagcaagcttacgaaaccggccgcggtaaaatcgtggttcgt
tctcggacacacatcgaaaccattcgtggcggtcgtgagaagatcgtggtcactgagatc
ccgtatgatgtcaataaagcgcagatgattaaaaaaatcgatgaattacgcatcaacaaa
aaagtggacggtattgccgaagtccgtgacgaaagcgaccgttttgggcttagcgttgtc
atcgaattaaaaaaagaagccgatgcacatggcatcttaaactatttatttaaaaatacc
gatctgcaaattgcatacaactttaacatggtcgctattgccgacatgcagccgaagtta
ctaggactcaaggccatgttggaagcatacgtcgaacatcgacgcgatgtggtcactcgg
cgaacgcgttttgacctcaacaaggccgctgctcgacagcacattgtcgaaggcttgatc
aaaatgctatcgattttggatcaggtcatcgccgcgattcgtgcttccaaggataaagga
gatgctaagcgtaacttagtcaagaagtttgatttttcggaagctcaggcggaagcgatt
gtttccttgcagctgtatcgattgaccaataccgatatcacggctttacagaaagaagca
gcacaattggcgaaagcaatcgccgagtatcaagatattttggcccgccccgctgcccgc
gatcgggtgattgaaggcgagttgaagcggattgccaaggagtacggggatgatcgtcgc
agcagcattcaagccaaaattgaaacgcttgaagtggcgacaacggtgacggtggctgat
gaaaccgtcatggtgcaggtttctcgtgatggctacgttaaacgcagttcactgcgcagt
tatcaggcggttgatccggccgacaatggtttgaaggccaatgatcttgccattttcact
ggcgaactgagtacgttgcagcatctttacatcgtgacaaatgccggaaatgtcatttat
cgaccagtgcatgaaattagtgatgcgcgttggaaagacaccggcgaacacttaagccaa
acagttggccttggcactgacgaaaaagtcttggcagtgtttgcttttgatcaactcgat
ggcgctggcagttttgtgttagggtcaagtgacgggtacatcaaacaaactgccttaagt
gatttgcagccgcaacggacgtacaagagtaagccgatgatggcgatgaagctgaaagac
ccagccgcgattgtcaccaatgcatacttcacgactgatcagcaacaggatgtctttgtg
gtcagccgccacgcttacggactgacattcccgttaagcgatgtgtcaactgtcggtgcc
cgggcaaccggcgttaaaagtatggatctaaagccagacgatgaggttgtcaatttcatt
ctagtgaaggatccaactacggctaaggtcggtattttgacccaacgtggcgccttcaaa
aagatggccttaagcgaggtcggggaaatgagtcgtgcccgtcgtggtttactggtcttg
cgtgagcttaagcgtgatccgcatcggattgtcgcgatgatgtcagtcgatgacgctacc
cgcctgaatgttttgaccgatacgggtaaggtaacgacccttaatccggcacaacatcca
gcaggtgaccgatattcgaatggttcgtttgtcattgacactgatgtccttggcaagcca
gtttttgttcaaaccaaagaagaaccagcagatcaagtcgaataa

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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