KEGG   Lentilactobacillus curieae: PL11_005240
Entry
PL11_005240       CDS       T04707                                 
Name
(GenBank) ATP-dependent helicase
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
lcu  Lentilactobacillus curieae
Pathway
lcu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PL11_005240
  09124 Replication and repair
   03420 Nucleotide excision repair
    PL11_005240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lcu03021]
    PL11_005240
   03400 DNA repair and recombination proteins [BR:lcu03400]
    PL11_005240
Enzymes [BR:lcu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     PL11_005240
Transcription machinery [BR:lcu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     PL11_005240
DNA repair and recombination proteins [BR:lcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     PL11_005240
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD PDDEXK_1 ResIII PhoH Helicase_C
Other DBs
NCBI-ProteinID: AQW21376
UniProt: A0A1S6QID7
Position
complement(1113902..1116259)
AA seq 785 aa
MANIQIGIRTLVEFILRRGDLVPTSVSDNSMAAGSRIHRKIQKSRPSTYSSEVALKTDFD
YLDTTYEISGRADGINRTDSETLIEEIKTSDVKFSELPDNTLDLYWAQAKVYGYILMTTE
GLDQVTIQLTYVQTPDEQITPTKIVYKKTEATEFFNSLISEYKKWLKLSRDLAESRVTTA
KAVTFPFPKYRAGQYDISKVVYKTIVNDKHLFLEAPTGTGKTISTLFPAVKSMGEELINR
IFYFTAKQSTRRVCEEAVKLLSGKGLAIKSITLTAREQISFPEEKDVPADQNPYMVGYYN
RIKPAILDIINNESQITKAEVQSYAQKHQVDPFEFSLDVSLFCDIIICDYNYLFDPQVHL
QRFFSVPDNTNCFLIDEAHNLVSRAREMYSATLSMKPIPNLIERLKANEEENQPVIKRLR
GLKRAFMRYSKESRDNDESTYSQVEPIPNFTSKVSKLIDAIHDWLSGRKPSDTVDAVVDY
YLSCRTYNLISQYYDETYRTRIVLTDDDILFRQFCIDPAQQISESLDLGRAAILFSATLS
PLDYYRRVLGNEPNSIKYAAGSSFPRNNFELIIQQGIDTTYRHRQNSIPDICASLFAMIN
GREGHYLAFFPSMTYMNKVVEAFNLAYPDIETHMQQADMSHEERTEFLNRFRATDGKTMM
GFAVLGGIFSEGVDLKSEQLIGVAIVGVGLPMINEESNLVKDYYDNDNHQGFMFAYQLPG
FNNVTQAAGRLIRTQTDKGIIVLMDARFAQNRYRSIFPTQWSKPRIINSPTALSDIVSKF
WRDNL
NT seq 2358 nt   +upstreamnt  +downstreamnt
atggctaacattcaaatcggtattcgaaccctggttgagtttatcctgcgacgtggtgac
ttagtgccaactagcgttagcgataactcgatggcagccggtagccgaattcatcgaaaa
attcaaaaatcacgacccagtacgtactcctcagaagttgcgttaaaaactgactttgat
tatcttgatacgacgtacgaaatttcgggaagagctgacggaatcaatcgcactgattcc
gaaacattaatcgaagaaatcaaaacttcagacgttaaatttagtgaactaccagacaat
acgctggatctctactgggcacaagccaaggtatatggttatattttgatgaccacagaa
ggccttgatcaagtgaccatccagctgacctacgttcaaactccagatgagcaaataacc
cccaccaaaatcgtttacaaaaagacggaagcaaccgaattttttaattcgctgatttct
gaatacaaaaaatggcttaaattaagtcgtgacttagcagaaagtcgtgtaacaactgcc
aaagcagttacttttccatttccaaaataccgtgctggccagtatgacatctcaaaagtt
gtttacaaaaccattgttaatgacaagcatctctttttagaggcacctactggcaccggc
aagacaatttccactttgtttcctgctgttaaatcaatgggcgaagaactaattaaccgg
attttttattttacagctaaacaaagcactcgacgggtctgtgaggaagcagtgaaacta
ctatcaggaaaaggactagctatcaaaagcatcactttaacggctagagagcagatttcc
ttccctgaagaaaaagatgtccccgctgaccaaaatccatacatggttggctactataat
cggatcaaaccagctattctagatataatcaacaatgaatcgcaaattacaaaggcagaa
gttcaaagttacgcccaaaagcatcaagtagatccctttgaattttcacttgatgtcagt
cttttttgtgacatcatcatctgtgattacaactacctatttgacccccaagtgcatctc
caacgatttttctcagttccagacaacactaactgttttttaattgacgaagcccacaac
ttagtttcgcgagcacgagagatgtactctgccacactaagtatgaagccaattcctaat
ttaattgaacggcttaaggctaacgaagaagaaaatcagcccgtaatcaagcgtcttcgg
ggtttaaaacgagcattcatgagatacagcaaggaatctcgtgataatgatgaatcaaca
tattcccaggtagaacccatccccaacttcactagcaaagtaagcaaactaattgatgca
attcatgattggctgtcaggcaggaaacctagtgatactgtggatgccgtggttgattac
tacctaagctgccggacttacaacctgattagtcagtattatgatgagacttatcgaact
agaatcgtcttgactgacgatgacatcttatttcgtcaattctgtatcgaccctgcccaa
caaatctccgaaagcctcgacttaggacgggctgccatcctattttcagcaactctaagt
ccactcgattactatcgtagggtgcttggcaacgaacctaacagtattaaatacgcagcc
ggatcctcattcccacgaaacaactttgaattaattattcaacaaggtatcgacacgact
tataggcaccggcaaaatagtattcctgacatctgtgccagtctttttgccatgattaat
ggtcgagaaggtcattacctggctttctttccttcaatgacttatatgaacaaggtagtt
gaagcatttaacctagcctatccagacatcgaaactcacatgcagcaagcagatatgtct
cacgaagaacgcaccgaattcttaaatcgttttcgagctactgacggtaaaaccatgatg
ggttttgctgttctaggtggaattttttctgagggagtagatttgaaaagtgagcagtta
atcggggttgccatcgttggggttggcctgccaatgatcaatgaggagtccaaccttgta
aaggactactacgacaacgacaaccatcagggattcatgtttgcctatcagcttcctgga
tttaacaacgttacccaagccgccggtcggctaatccgaacgcaaactgacaaaggaatc
attgtcttaatggatgctagatttgcccaaaatcgttacagatcaattttccctactcag
tggtcaaaaccacggataatcaacagtccaactgctctttcagacattgtcagcaaattt
tggcgggacaatttataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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