KEGG   Lacticaseibacillus paracasei W56: BN194_01390
Entry
BN194_01390       CDS       T02337                                 
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
lcw  Lacticaseibacillus paracasei W56
Pathway
lcw00470  D-Amino acid metabolism
lcw00550  Peptidoglycan biosynthesis
lcw01100  Metabolic pathways
lcw01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:lcw00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    BN194_01390 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    BN194_01390 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    BN194_01390 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:lcw01011]
    BN194_01390 (ddl)
Enzymes [BR:lcw01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     BN194_01390 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:lcw01011]
 Precursor biosynthesis
  Amino acid ligase
   BN194_01390 (ddl)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp_3 RimK GARS_A CPSase_L_D2 ATP-grasp DUF1902
Other DBs
NCBI-ProteinID: CCK21086
UniProt: K0MRY4
Position
complement(138372..139640)
AA seq 422 aa
MLTVCIAFFDSLSALFRESAFTTVAEGLKAFLILHHFLASLSPMSPDCAKLRFLSNSDNT
RRYYHMKIVVLAGGRSTERNVSISSGYRITNALRQKGQQATFIDLFLGYDLEGKTVEQVF
DDANTSKDLNISDAILTDEDINKLRPDGSTQLFGPNVMAICKAADIVFLALHGGDGENGK
VQAVFDINGVKYTGSGPLASGITMNKVFSKEVMLYHGIQTSGFKEFKRDQGPKQTVPFDF
PVVVKPTSGGSSVGTHIIHNQEELESGLEDVFRFDNSAIVEEFTPGREFSLGVVNGHAYS
AIEIKVRSGWYDFKHKFQAGYTDFITPPKDLDEDVHQAMKDVAVQTMDVLGLQNYGRIDF
FANEKGVWVIEANNLPGMTPLSLLPQEAEADGVDYGDLVMDIVNGKLKLYADGMTEAGLL
TK
NT seq 1269 nt   +upstreamnt  +downstreamnt
ttgctaaccgtgtgtattgcattctttgactccttatctgcgctgtttagagaaagcgcg
ttcacaaccgtggcagaaggtttaaaagccttcttaatattacaccattttttagcatct
ttatcgccgatgagcccggattgtgctaaactgaggtttctatcaaactcggataatacg
cggaggtactatcacatgaaaattgtcgttttagcaggcggccggagcacggagcgcaat
gtttccatttctagcggctaccggatcacgaacgccttgcggcaaaaagggcagcaggcc
acctttattgacctgtttcttggctacgacctcgaagggaagacggtcgaacaggttttt
gatgacgccaacaccagcaaggatctgaatatttcagatgcgattctgactgatgaagac
atcaataagttacggccagatggcagcacccagctatttggtcccaatgttatggcgatc
tgcaaagcagcagacattgttttcctcgctttgcatggtggcgatggcgaaaacggtaag
gttcaggctgtgtttgacatcaacggggtcaagtatactggctctggcccgctggcttca
ggcatcaccatgaacaaggttttcagtaaggaagtcatgttgtatcatggcattcagact
tcaggattcaaggaattcaagcgcgatcaagggccaaaacaaacggttccgtttgacttt
ccagttgttgtcaagccaacatccggtggttccagcgttgggacacatattattcataat
caggaagaactcgaaagcggccttgaagatgttttccgcttcgacaacagtgccattgtt
gaagagttcaccccaggccgcgaattctcgttaggcgttgtcaatggccacgcttactcg
gccatcgaaatcaaggtgcgttctggttggtatgatttcaagcataaattccaagccggc
tacaccgacttcatcaccccgccaaaggatctcgatgaagatgtccatcaggctatgaaa
gatgttgccgtccaaacgatggatgttctgggcctgcaaaattacggccgaatcgacttc
ttcgccaacgaaaaaggtgtttgggtcattgaagccaacaacctgccggggatgacacca
ctgtcactgttgccgcaagaagccgaagcagacggtgttgactacggcgatttggtgatg
gatattgtcaacggcaagctcaagctctacgctgacggcatgaccgaggctggactctta
acgaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

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