KEGG   Lacticaseibacillus casei 12A: LCA12A_0854
Entry
LCA12A_0854       CDS       T03665                                 
Name
(GenBank) endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
lcx  Lacticaseibacillus casei 12A
Pathway
lcx03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lcx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LCA12A_0854
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcx03400]
    LCA12A_0854
Enzymes [BR:lcx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     LCA12A_0854
DNA repair and recombination proteins [BR:lcx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     LCA12A_0854
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: EKP99229
Position
complement(1488820..1489707)
AA seq 295 aa
MLIGANVSMKGSKMLLGAVEEAASYTANTLQFYTGAPQNTRRKPTNEMMIPEGLAAMTKD
GISHTVIHAPYIVNLGNTKKPENFTFAVQFMREEVARADALHAYTMPFHPGAHVGAGPEA
AIKQIIKGLNEIIDPNQKVTIALETMAGKGTEIGRSFDELAAIIDGVTHNEKLRVTFDTC
HTNDAGYDIKNDFDGVLNEFDHIIGLDRLSVIHVNDSKNPQGSHKDRHANIGFGTIGFDA
LNKIAHHPALAELPKILETPYVGPDKKHQVPPYGAEIKWLKTGDFQPDELRHLMV
NT seq 888 nt   +upstreamnt  +downstreamnt
atgttaataggagctaacgtcagtatgaaagggtcaaaaatgttgcttggtgccgttgaa
gaagccgccagttatacggctaacacgcttcaattctataccggggcaccgcaaaacacg
cggcgtaaaccaactaacgaaatgatgattcctgaagggctagcagcgatgacgaaagac
ggcattagtcataccgtgattcatgccccgtatatcgtcaatctcggcaataccaagaaa
ccggaaaactttacatttgcggtgcagttcatgcgagaagaagtcgctcgagcagatgct
cttcatgcctataccatgccctttcatcccggtgcgcatgttggcgctggtccggaagca
gcgattaaacaaattatcaaaggactcaatgagatcattgatcctaatcaaaaagtgacc
attgccttggaaacaatggctggcaaaggcacggagatcgggcgctcttttgatgaatta
gctgccattattgatggtgtgacacataacgaaaagcttcgggtaacctttgatacttgt
cataccaatgatgctggctatgatatcaaaaacgactttgacggtgttctcaacgagttt
gatcacatcattggccttgatcgactcagtgtgattcatgtgaatgactcgaaaaatccc
caaggcagtcataaagatcggcatgccaacattggctttggcacgatcgggtttgacgcc
ttaaacaagatcgctcatcacccagccttggccgaattacccaagatactcgaaaccccg
tatgttggtcctgacaaaaaacatcaggtaccgccatacggggcagagatcaaatggcta
aaaacaggggactttcagcccgatgagttacgccacttgatggtttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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