KEGG   Lacticaseibacillus casei 12A: LCA12A_1571
Entry
LCA12A_1571       CDS       T03665                                 
Name
(GenBank) DNA-binding protein HBsu
  KO
K03530  DNA-binding protein HU-beta
Organism
lcx  Lacticaseibacillus casei 12A
Brite
KEGG Orthology (KO) [BR:lcx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lcx03032]
    LCA12A_1571
   03036 Chromosome and associated proteins [BR:lcx03036]
    LCA12A_1571
   03400 DNA repair and recombination proteins [BR:lcx03400]
    LCA12A_1571
DNA replication proteins [BR:lcx03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    LCA12A_1571
Chromosome and associated proteins [BR:lcx03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    LCA12A_1571
DNA repair and recombination proteins [BR:lcx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      LCA12A_1571
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HU-CCDC81_bac_2 DUF2267 Ribosomal_L12
Other DBs
NCBI-ProteinID: EKP99896
Position
1338130..1338411
AA seq 93 aa
MFMANKAELIESVATATGLTKKDATAAVDAVFGSIQDSLSKGDKVQLIGFGNFEVRERAA
RKGRNPQTGAEIKIPASKVPAFKPGKALKDAVK
NT seq 282 nt   +upstreamnt  +downstreamnt
atgttcatggcaaacaaagcagaattgatcgaaagtgttgcaaccgcaactggtttgacc
aagaaggatgcaaccgcagctgttgatgcagtattcggttctatccaagactccctttca
aagggtgacaaggttcagttgatcggctttggtaacttcgaagtgcgtgagcgtgccgct
cgtaagggccgcaacccacaaaccggtgccgagatcaagattccagcatccaaggtacca
gcattcaagcctggtaaagcactcaaggacgccgttaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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