KEGG   Lacticaseibacillus paracasei Zhang: LCAZH_1614
Entry
LCAZH_1614        CDS       T01280                                 
Name
(GenBank) tRNA and rRNA cytosine-C5-methylase
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
lcz  Lacticaseibacillus paracasei Zhang
Brite
KEGG Orthology (KO) [BR:lcz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lcz03009]
    LCAZH_1614
Enzymes [BR:lcz01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     LCAZH_1614
Ribosome biogenesis [BR:lcz03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    LCAZH_1614
SSDB
Motif
Pfam: Methyltr_RsmB-F NusB Methyltransf_31 Methyltr_RsmF_N Methyltransf_25 Methyltransf_15 FtsJ Methyltransf_24 Methyltransf_11 Met_10 UPF0020 Methyltransf_3 GCD14 Tricorn_PDZ DUF4855 Acetyltransf_CG Cons_hypoth95 CMAS
Other DBs
NCBI-ProteinID: ADK18843
Position
complement(1580827..1582167)
AA seq 446 aa
MTPNNPRLLAVETLSRVTGQGGYSNLTLDHVINSHKLTPRDAGLLTNIVYGVIQHQLTLD
FYLAPFIKGRKLDNWIRCLLDTAVYQLQYLDKVPARAVFFDSTEIAKKLGHQGIAKFVTG
VLRNAQRTGFPDPAAIADPVKRLSIESSTPVWLVEKLTAQLGEPKTRAILNVINVPAHAS
LRVNTTKITPAALLASLKPEFPDLKESPLTPIGLIAPSGHLAGTSAFVKGEYTMQDESSM
LVAPSLDIQPGDVVLDACAAPGGKTTHIAQYLDPKQGGQVTALDLHANKVRLINKNAKRL
GLTDRIHAQVLDARKVATTFSANSFDKILVDAPCSGLGLIRRKPEIKYTKTPEDPAHLQQ
IQLAILNSVAPTLKIGGRLTYSTCTMVKEENQDVVAQFLAAHPEFEQVSVPTLKPLHKAH
SAPALQLFPDDYDTDGFFIASLIRRK
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgaccccgaataatccgcgtttattagctgttgaaaccttgtcgcgagtcactgggcaa
ggtggctattcaaatctgacattggatcacgtgattaatagtcacaagttgacgccgcgt
gatgctggcttgctgacaaacatcgtctatggtgtgatccagcatcagctgacgttggat
ttttatctggcacctttcatcaaaggccggaaactcgacaattggattcggtgtttgctt
gatacagccgtttatcaactgcagtatcttgataaagtaccagcacgcgcggtttttttt
gatagtacagaaattgccaagaagcttggacatcaaggaatcgccaaatttgtgactggg
gttttgcgaaatgctcagcgaacaggctttcctgacccagccgcaatcgctgatcctgtg
aagcgattgtcaatcgaaagcagtacgccggtgtggcttgttgaaaaattgacggcacaa
ctgggtgaaccgaaaacccgtgccattttgaatgtcatcaatgtcccagcgcatgcttca
ctgcgcgtcaacacgacgaaaatcaccccagctgccttgcttgcttctttaaagccggaa
ttccccgatttgaaggaaagtcctttgaccccaattggcctcattgcacctagtggccac
ttagcagggacatccgcatttgtcaaaggtgagtatacgatgcaagatgaaagttcgatg
ctggtggccccaagtttagacatccagcctggggatgttgttttggatgcttgtgccgct
cctggcggtaaaaccacccacattgctcagtatcttgatccaaaacaaggcggacaagtg
acggcgcttgatctgcacgccaacaaagtgcgtttgatcaataaaaatgctaaacgcctg
ggcttgacggatcgcatccatgcacaggtgctggatgcacgtaaggttgcgacaacattt
tctgccaattcttttgacaaaattttggtggatgccccttgttccggattaggtttaatt
cgacgtaaaccggaaatcaagtacacaaaaacgcctgaagatccggcgcatttgcaacaa
attcagctagcaatcttaaatagtgtggcaccaaccttaaaaatcggtggccgcctgacg
tatagtacatgtacaatggtgaaagaagagaatcaagatgtggttgcacaatttttggcg
gctcatcctgagttcgagcaagtttcagtaccaaccttgaagccattgcacaaggcgcat
agcgcaccagcgctgcaactgtttccagatgattatgatacggacggatttttcattgcc
agtttgattcgtcgcaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (18)   
   Pfam (18)   
All databases (26)   

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