KEGG   Lacticaseibacillus paracasei Zhang: LCAZH_1698
Entry
LCAZH_1698        CDS       T01280                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lcz  Lacticaseibacillus paracasei Zhang
Pathway
lcz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lcz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LCAZH_1698
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcz03400]
    LCAZH_1698
Enzymes [BR:lcz01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LCAZH_1698
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LCAZH_1698
DNA repair and recombination proteins [BR:lcz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     LCAZH_1698
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N Auto_anti-p27 RNHCP GGDEF_2
Other DBs
NCBI-ProteinID: ADK18926
Position
complement(1657195..1658043)
AA seq 282 aa
MPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQKEIVGSEITTIDRRGKYL
LMRLSNGETIISHLRMEGRYYVVKDASTPFDKHDHVTFTFQDGSQLRYRDLRKFGRMRLI
KTGQEDQVPALAKLGPEPTPRTFDETEFARRLKRHHKPIKSVLLDQTVVAGVGNIYADEV
LWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAHTYVDAEGNRGSFQNALH
VYDREDTPCDRCGTTIVKIKVGQRGTHYCPHCQPLHQRRRPA
NT seq 849 nt   +upstreamnt  +downstreamnt
atgcctgaattacctgaagtggaaacagttcgccgctcgcttctgccgttagtcaaaaat
aaagtcattactgccatcaacactaactgggagaaaatcctgatcaatgggttggcgact
tttcaaaaggaaattgtcggcagtgagatcacgaccattgatcggcgcggcaagtatctt
ttgatgcgcctcagcaatggtgaaacgattatcagccatctgcgtatggaagggcgttac
tatgttgtcaaagatgcaagcacaccttttgataagcatgatcacgttacgttcacattt
caggatggtagtcagttgcggtatcgggatctgcgaaagttcggtcggatgcgattgatt
aaaactggtcaggaagatcaggtgccagctcttgctaagctcggaccggaaccaacgcca
cgcacgtttgacgagactgagtttgcccggcgcctgaaacgccatcataaaccgattaag
tcggttttactcgatcaaaccgtggtcgctggtgtgggcaatatttacgctgatgaggta
ctttggttaagtcggctcaatccgctgcagccagctgacaccttgaaatctaaagaaatc
aaaacactgcatgacgcgattatccaagaattaaacgcagccattgcggcaggcggcacc
agcgcgcatacgtatgttgatgcagaaggcaatcgcggttcttttcaaaatgccttgcac
gtctatgatcgggaagataccccgtgcgatcgctgcggcacgacgattgtcaaaattaag
gttggtcagcgcggaacccattactgcccacactgtcagccattacatcaaaggaggcgg
ccagcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system