KEGG   Lacticaseibacillus paracasei Zhang: LCAZH_2202
Entry
LCAZH_2202        CDS       T01280                                 
Name
(GenBank) mismatch repair ATPase (mutS family)
  KO
K03555  DNA mismatch repair protein MutS
Organism
lcz  Lacticaseibacillus paracasei Zhang
Pathway
lcz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lcz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    LCAZH_2202
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcz03400]
    LCAZH_2202
DNA repair and recombination proteins [BR:lcz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     LCAZH_2202
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_29 AAA_14 AAA_28 Rad17
Other DBs
NCBI-ProteinID: ADK19411
UniProt: K6Q9X6
Position
complement(2167127..2169709)
AA seq 860 aa
MNFVPQKTSETPMMQQYNEIKAQYPDAFLFYRIGDFYELFNDDAIKGAQLLELTLTARNK
SADDPIPMAGVPHHAVQSYVDILIDHGYKVAICEQMEDPKKAVGMVKRAVIQLVTPGTNV
DIKAGAAKSNNYITAVMPHAAGYAFAYADVSTGELKVTDLKSKFALQNELSALATKEIVV
PEELTDDDAGMLKQGERLLSVQPDAEPTSEGSYVSQALTDPAEAAVVQMLMAYLLNTQKR
SLAHIQKAVAYQPSAYLEMDQDARSNLDILQNSRTGRKGDTLLSLLDSTKTAMGGRLLKQ
WLDRPLLDIDAISVRQNQVQDLLDHFFERSELQERLTKVYDLERLAGRVAFGTVNGRDLI
QLQTSLDQIPAIQDVLGKLDDGSFKALRSKMDPVSDVAGLIRRAIEPEPPISVTDGGLIL
RGYNQKLDSYRDAMKNSKQWIAELEASERKATGIHTLKIRYNKVFGYFIEVTKSNLDKIP
EGRYERKQTLTNAERFITPELKEKETLILEAQESSTALEYDLFQDIRDKVKAQIKRLQAL
AAQISSLDVLQSFATVAENSHYVRPTMHAGTHDINVKGGRHPVVEHVLGRDSYIPNDVIM
NHDTDMLLITGPNMSGKSTYMRQLALIVIMAQAGSFVPADVADLPIFDQIFTRIGAADDL
ANGESTFMVEMLEANAALSHATASSLILFDEIGRGTATYDGMALAQAIIEFLHDHVHAKT
LFSTHYHELTSLSDSLAKLKNVHVGAVEEHGNLVFLHKMMPGPADKSYGIHVAKLAGLPA
DLLARADTILKQLEADAPNKTAPAPAPQVEEQQLSLFEEPKPTPKNSPILTKLAKFDLMA
ATPMDAMNFIFDLQKHLKKK
NT seq 2583 nt   +upstreamnt  +downstreamnt
gtgaatttcgtgccgcaaaaaaccagtgaaacgcctatgatgcagcagtacaacgaaatc
aaggcgcaatatccggatgcgtttttgttttaccgcatcggagatttttatgaattattc
aatgatgatgccatcaaaggtgctcagttgctcgaactaacattaactgcacgaaacaag
agtgctgacgatcctatcccaatggctggtgtcccgcaccatgctgtccaaagttacgtt
gatattttaattgaccacggttacaaagttgcgatctgtgaacagatggaggaccctaaa
aaagctgtcgggatggttaaacgagccgtcattcagttggtaacgccagggacaaatgtt
gacatcaaagccggtgcagccaagtcgaataactatattaccgctgtgatgccgcatgca
gcaggttatgcgtttgcgtatgccgatgtatcgaccggtgagctcaaagtgacggatcta
aaaagcaaatttgctctgcaaaacgaactaagtgcgctggccaccaaagaaatcgttgtg
cctgaggaattgaccgatgacgatgcgggaatgctcaagcaaggggaacggcttctgtca
gtccaaccggatgccgaaccgacgagtgaaggcagttatgtgtcacaggcgctaaccgat
cctgcagaggctgccgttgtgcagatgctaatggcctatttattgaacacgcagaaacgc
agcttggcccatattcaaaaagcggttgcttatcaaccttccgcttatctggaaatggat
caggacgcccgtagtaacctcgacattttgcaaaacagcagaacgggacgcaaaggtgac
accttgttgtcgttgcttgattcgaccaaaacagcgatgggtggccgcttattgaaacaa
tggctggatcgaccattactggatattgatgcgatcagtgtgcggcaaaatcaggttcag
gatttgttggatcacttttttgaacgcagtgagttgcaggaacgactaactaaagtctat
gatcttgagcggttagctggccgagttgcttttggtaccgttaatggtcgtgacttaatt
cagttgcaaacctctttggatcagatcccggctattcaggatgtgctgggtaagcttgat
gatggcagttttaaggcacttcgcagtaaaatggacccagtcagcgatgtcgctggattg
attcgccgtgcgattgaacctgaaccgccgatttcagtgacagacggtggcttgatcctc
cgagggtacaatcaaaaactggatagctatcgtgatgccatgaagaattccaaacaatgg
atcgctgaactagaagcatcggaacgcaaagcaactggcattcacacacttaaaattcgt
tacaacaaggtttttggttactttatcgaagtgactaagtccaatttggacaaaataccg
gaagggcgctatgaacgcaaacagacactgacaaacgctgaacggtttatcaccccagag
ctgaaagaaaaggagaccttgattcttgaagcgcaggaaagctcaacagcgcttgagtat
gatcttttccaagacattcgcgacaaggtcaaagcccagatcaaacgactacaagcttta
gccgcccaaatttcatctttggacgtgttgcaaagctttgcaacagtggctgaaaacagt
cattatgtccgaccaacgatgcatgccgggactcatgatatcaatgttaagggtggtcgc
cacccagtcgtggaacatgtacttggccgagacagttatattcctaacgatgtcatcatg
aatcacgacaccgatatgttgctgatcaccgggcctaacatgtcagggaaaagtacctac
atgcgccaattagccttgattgttatcatggcgcaagcgggttcgtttgtcccggcagat
gtagctgacttaccgatttttgatcagatctttacccgaatcggagcggctgatgatctt
gccaatggcgaaagtaccttcatggttgaaatgctggaagccaacgctgcattaagccac
gcgacggcttccagcctgattctttttgatgagatcggccgcggcacggcaacgtatgat
gggatggcgctggcacaggcaattattgagttcttgcatgatcatgtccacgccaaaacg
ctgttctcaacgcattatcatgagctaactagtttgtcagactccttggcgaagttaaag
aatgtccatgttggtgccgttgaggagcatggcaatctggttttcttgcacaaaatgatg
cctggccctgccgataagagttatgggattcacgtcgccaagctcgccggtttaccggca
gacttgttagcgcgtgctgatacgattttgaaacagcttgaagccgatgcacccaataaa
acggcaccagcaccagcgccgcaagttgaagagcaacaattgtcgttgtttgaagaacca
aaaccgacgccaaagaatagtccgattctgacgaaacttgcgaaatttgacttgatggcg
gccacaccgatggacgcgatgaatttcatatttgacctgcagaagcatttaaagaagaag
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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