KEGG   Lactobacillus delbrueckii subsp. bulgaricus ND02: LDBND_1343
Entry
LDBND_1343        CDS       T01360                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
lde  Lactobacillus delbrueckii subsp. bulgaricus ND02
Pathway
lde03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lde00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LDBND_1343
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lde03021]
    LDBND_1343
   03400 DNA repair and recombination proteins [BR:lde03400]
    LDBND_1343
Enzymes [BR:lde01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     LDBND_1343
Transcription machinery [BR:lde03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     LDBND_1343
DNA repair and recombination proteins [BR:lde03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      LDBND_1343
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: ADQ61377
Position
complement(1388691..1388912)
AA seq 73 aa
MRITYPSIDKLLDEVDSRYSLSVLAAKRAGELEAGKPGALDNYHNLKPVGQALEEIAAGK
VTIDADPHGEADK
NT seq 222 nt   +upstreamnt  +downstreamnt
atgagaattacctatccatcaattgacaagctgctagatgaagttgattcaagatactca
ctgtcagttctggctgccaagcgggctggtgaactggaagccggcaagccgggtgctttg
gacaactaccacaacttgaagccggtcggccaggcattggaagaaattgctgccggcaag
gtaacgattgacgctgaccctcacggtgaagctgacaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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